Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D3EA0A087X179 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D3EA0A087X179 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TBC1D3EA0A087X179 AC087393.1-201ENST00000582896 145 ntBASIC24.23■■□□□ 1.47
TBC1D3EA0A087X179 AC142472.1-201ENST00000612013 1741 ntBASIC24.23■■□□□ 1.47
TBC1D3EA0A087X179 AC142086.6-201ENST00000621154 1765 ntBASIC24.23■■□□□ 1.47
TBC1D3EA0A087X179 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TBC1D3EA0A087X179 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 MIR4508-201ENST00000584178 70 ntBASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
TBC1D3EA0A087X179 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.21■■□□□ 1.47
TBC1D3EA0A087X179 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.21■■□□□ 1.47
TBC1D3EA0A087X179 RPS2P7-201ENST00000447334 885 ntBASIC24.21■■□□□ 1.47
TBC1D3EA0A087X179 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
TBC1D3EA0A087X179 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.21■■□□□ 1.47
TBC1D3EA0A087X179 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TBC1D3EA0A087X179 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.2■■□□□ 1.47
TBC1D3EA0A087X179 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TBC1D3EA0A087X179 AP004609.3-201ENST00000610705 1884 ntBASIC24.2■■□□□ 1.46
TBC1D3EA0A087X179 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TBC1D3EA0A087X179 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.2■■□□□ 1.46
TBC1D3EA0A087X179 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TBC1D3EA0A087X179 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TBC1D3EA0A087X179 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TBC1D3EA0A087X179 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TBC1D3EA0A087X179 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TBC1D3EA0A087X179 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 AC019171.1-201ENST00000601251 1056 ntBASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
TBC1D3EA0A087X179 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TBC1D3EA0A087X179 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TBC1D3EA0A087X179 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.16■■□□□ 1.46
TBC1D3EA0A087X179 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.16■■□□□ 1.46
TBC1D3EA0A087X179 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TBC1D3EA0A087X179 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TBC1D3EA0A087X179 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 KRT18P10-201ENST00000388836 1287 ntBASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 AC009299.2-201ENST00000482477 511 ntBASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TBC1D3EA0A087X179 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TBC1D3EA0A087X179 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.14■■□□□ 1.46
TBC1D3EA0A087X179 AC103724.3-201ENST00000564481 992 ntBASIC24.14■■□□□ 1.45
TBC1D3EA0A087X179 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.14■■□□□ 1.45
TBC1D3EA0A087X179 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
TBC1D3EA0A087X179 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 LONRF2P2-201ENST00000439212 571 ntBASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.13■■□□□ 1.45
TBC1D3EA0A087X179 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TBC1D3EA0A087X179 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TBC1D3EA0A087X179 AL031848.2-201ENST00000607670 837 ntBASIC24.12■■□□□ 1.45
TBC1D3EA0A087X179 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
TBC1D3EA0A087X179 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.12■■□□□ 1.45
TBC1D3EA0A087X179 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TBC1D3EA0A087X179 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
TBC1D3EA0A087X179 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D3EA0A087X179 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D3EA0A087X179 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D3EA0A087X179 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.1■■□□□ 1.45
TBC1D3EA0A087X179 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms