Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.32■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.32■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.3■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.29■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.29■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.28■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 RAP2CP1-202ENST00000605179 643 ntBASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
SYNJ2BP-COX16A0A087WUM0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 AL592293.1-201ENST00000502889 1188 ntBASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 ERN1-208ENST00000606895 2068 ntBASIC25.24■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.24■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 NTF6A-201ENST00000591175 560 ntBASIC25.24■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 AC092803.2-201ENST00000564287 1899 ntBASIC25.23■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.22■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.21■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 AC091060.1-201ENST00000623524 1766 ntBASIC25.21■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SYNJ2BP-COX16A0A087WUM0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 KRT18P60-201ENST00000312876 1297 ntBASIC25.2■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.19■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.18■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.17■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.16■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.16■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms