Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
ZC3H4Q9UPT8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ZC3H4Q9UPT8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.05■■■□□ 2.4
ZC3H4Q9UPT8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H4Q9UPT8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
ZC3H4Q9UPT8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ZC3H4Q9UPT8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.03■■■□□ 2.4
ZC3H4Q9UPT8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 RPS2P7-201ENST00000447334 885 ntBASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 AC022616.5-201ENST00000518796 181 ntBASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 AC131281.2-201ENST00000520478 145 ntBASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.02■■■□□ 2.4
ZC3H4Q9UPT8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
ZC3H4Q9UPT8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H4Q9UPT8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30■■■□□ 2.39
ZC3H4Q9UPT8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
ZC3H4Q9UPT8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30■■■□□ 2.39
ZC3H4Q9UPT8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30■■■□□ 2.39
ZC3H4Q9UPT8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ZC3H4Q9UPT8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZC3H4Q9UPT8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.98■■■□□ 2.39
ZC3H4Q9UPT8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZC3H4Q9UPT8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZC3H4Q9UPT8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZC3H4Q9UPT8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
ZC3H4Q9UPT8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZC3H4Q9UPT8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ZC3H4Q9UPT8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
ZC3H4Q9UPT8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZC3H4Q9UPT8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
ZC3H4Q9UPT8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZC3H4Q9UPT8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ZC3H4Q9UPT8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.96■■■□□ 2.39
ZC3H4Q9UPT8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
ZC3H4Q9UPT8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
ZC3H4Q9UPT8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
ZC3H4Q9UPT8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
ZC3H4Q9UPT8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
ZC3H4Q9UPT8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 AC100797.4-201ENST00000631653 1827 ntBASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 AC110285.6-201ENST00000617652 491 ntBASIC29.94■■■□□ 2.38
ZC3H4Q9UPT8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 AC137630.3-201ENST00000607245 391 ntBASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 AC005837.3-201ENST00000612163 286 ntBASIC29.93■■■□□ 2.38
ZC3H4Q9UPT8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZC3H4Q9UPT8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.92■■■□□ 2.38
ZC3H4Q9UPT8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.92■■■□□ 2.38
ZC3H4Q9UPT8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.92■■■□□ 2.38
ZC3H4Q9UPT8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.92■■■□□ 2.38
ZC3H4Q9UPT8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.91■■■□□ 2.38
ZC3H4Q9UPT8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.91■■■□□ 2.38
ZC3H4Q9UPT8 AL136116.3-201ENST00000402907 1138 ntBASIC29.91■■■□□ 2.38
ZC3H4Q9UPT8 AC133561.4-201ENST00000566112 224 ntBASIC29.91■■■□□ 2.38
ZC3H4Q9UPT8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.91■■■□□ 2.38
ZC3H4Q9UPT8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZC3H4Q9UPT8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 AL359504.2-201ENST00000605506 1601 ntBASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 KRT18P24-201ENST00000344739 1156 ntBASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZC3H4Q9UPT8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
ZC3H4Q9UPT8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
ZC3H4Q9UPT8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.89■■■□□ 2.38
ZC3H4Q9UPT8 AC092666.2-201ENST00000613287 246 ntBASIC29.89■■■□□ 2.38
ZC3H4Q9UPT8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
ZC3H4Q9UPT8 AC021242.3-201ENST00000607598 1377 ntBASIC29.88■■■□□ 2.37
ZC3H4Q9UPT8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.88■■■□□ 2.37
ZC3H4Q9UPT8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
ZC3H4Q9UPT8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.88■■■□□ 2.37
ZC3H4Q9UPT8 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.88■■■□□ 2.37
ZC3H4Q9UPT8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZC3H4Q9UPT8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
ZC3H4Q9UPT8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZC3H4Q9UPT8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
ZC3H4Q9UPT8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.87■■■□□ 2.37
ZC3H4Q9UPT8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZC3H4Q9UPT8 TSPY9P-201ENST00000440215 945 ntBASIC29.86■■■□□ 2.37
ZC3H4Q9UPT8 TSPY11P-201ENST00000442607 1045 ntBASIC29.86■■■□□ 2.37
ZC3H4Q9UPT8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.86■■■□□ 2.37
ZC3H4Q9UPT8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ZC3H4Q9UPT8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZC3H4Q9UPT8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms