Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
CISHQ9NSE2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.11■■□□□ 1.77
CISHQ9NSE2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.11■■□□□ 1.77
CISHQ9NSE2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CISHQ9NSE2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.11■■□□□ 1.77
CISHQ9NSE2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CISHQ9NSE2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
CISHQ9NSE2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CISHQ9NSE2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CISHQ9NSE2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
CISHQ9NSE2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CISHQ9NSE2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CISHQ9NSE2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CISHQ9NSE2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CISHQ9NSE2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.09■■□□□ 1.77
CISHQ9NSE2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CISHQ9NSE2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.08■■□□□ 1.77
CISHQ9NSE2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CISHQ9NSE2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CISHQ9NSE2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CISHQ9NSE2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.08■■□□□ 1.77
CISHQ9NSE2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CISHQ9NSE2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CISHQ9NSE2 RARRES2P2-201ENST00000394842 485 ntBASIC26.07■■□□□ 1.76
CISHQ9NSE2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.07■■□□□ 1.76
CISHQ9NSE2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CISHQ9NSE2 MIR3960-201ENST00000583311 91 ntBASIC26.07■■□□□ 1.76
CISHQ9NSE2 AC007029.1-201ENST00000604183 313 ntBASIC26.07■■□□□ 1.76
CISHQ9NSE2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.07■■□□□ 1.76
CISHQ9NSE2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CISHQ9NSE2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CISHQ9NSE2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CISHQ9NSE2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CISHQ9NSE2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CISHQ9NSE2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CISHQ9NSE2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.05■■□□□ 1.76
CISHQ9NSE2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CISHQ9NSE2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.05■■□□□ 1.76
CISHQ9NSE2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CISHQ9NSE2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CISHQ9NSE2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CISHQ9NSE2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CISHQ9NSE2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CISHQ9NSE2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CISHQ9NSE2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CISHQ9NSE2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CISHQ9NSE2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.02■■□□□ 1.76
CISHQ9NSE2 RP9P-202ENST00000450133 1212 ntBASIC26.02■■□□□ 1.76
CISHQ9NSE2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CISHQ9NSE2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.02■■□□□ 1.76
CISHQ9NSE2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CISHQ9NSE2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.02■■□□□ 1.76
CISHQ9NSE2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CISHQ9NSE2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CISHQ9NSE2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CISHQ9NSE2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CISHQ9NSE2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CISHQ9NSE2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CISHQ9NSE2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CISHQ9NSE2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26■■□□□ 1.75
CISHQ9NSE2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26■■□□□ 1.75
CISHQ9NSE2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26■■□□□ 1.75
CISHQ9NSE2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26■■□□□ 1.75
CISHQ9NSE2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26■■□□□ 1.75
CISHQ9NSE2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CISHQ9NSE2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.99■■□□□ 1.75
CISHQ9NSE2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.99■■□□□ 1.75
CISHQ9NSE2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CISHQ9NSE2 AC093536.1-201ENST00000569153 554 ntBASIC25.99■■□□□ 1.75
CISHQ9NSE2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CISHQ9NSE2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CISHQ9NSE2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CISHQ9NSE2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.97■■□□□ 1.75
CISHQ9NSE2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CISHQ9NSE2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CISHQ9NSE2 AC091060.1-201ENST00000623524 1766 ntBASIC25.97■■□□□ 1.75
CISHQ9NSE2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CISHQ9NSE2 AC092803.2-201ENST00000564287 1899 ntBASIC25.96■■□□□ 1.75
CISHQ9NSE2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.96■■□□□ 1.75
CISHQ9NSE2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CISHQ9NSE2 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.96■■□□□ 1.75
CISHQ9NSE2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.96■■□□□ 1.75
CISHQ9NSE2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CISHQ9NSE2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.95■■□□□ 1.74
CISHQ9NSE2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
CISHQ9NSE2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.94■■□□□ 1.74
CISHQ9NSE2 AC026202.3-201ENST00000600805 1127 ntBASIC25.94■■□□□ 1.74
CISHQ9NSE2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.94■■□□□ 1.74
CISHQ9NSE2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CISHQ9NSE2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CISHQ9NSE2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CISHQ9NSE2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CISHQ9NSE2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.92■■□□□ 1.74
CISHQ9NSE2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CISHQ9NSE2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.92■■□□□ 1.74
CISHQ9NSE2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.92■■□□□ 1.74
CISHQ9NSE2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
CISHQ9NSE2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CISHQ9NSE2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CISHQ9NSE2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms