Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CHD8Q9HCK8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CHD8Q9HCK8 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.42■■□□□ 1.34
CHD8Q9HCK8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD8Q9HCK8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD8Q9HCK8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.41■■□□□ 1.34
CHD8Q9HCK8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD8Q9HCK8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD8Q9HCK8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD8Q9HCK8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD8Q9HCK8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD8Q9HCK8 AC087393.1-201ENST00000582896 145 ntBASIC23.4■■□□□ 1.34
CHD8Q9HCK8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD8Q9HCK8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.4■■□□□ 1.34
CHD8Q9HCK8 AL162430.1-201ENST00000480705 870 ntBASIC23.4■■□□□ 1.34
CHD8Q9HCK8 AC090192.1-201ENST00000517740 490 ntBASIC23.4■■□□□ 1.34
CHD8Q9HCK8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.39■■□□□ 1.34
CHD8Q9HCK8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD8Q9HCK8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CHD8Q9HCK8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD8Q9HCK8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.38■■□□□ 1.33
CHD8Q9HCK8 AC022616.5-201ENST00000518796 181 ntBASIC23.38■■□□□ 1.33
CHD8Q9HCK8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD8Q9HCK8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHD8Q9HCK8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CHD8Q9HCK8 AC106739.1-201ENST00000617035 715 ntBASIC23.37■■□□□ 1.33
CHD8Q9HCK8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
CHD8Q9HCK8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD8Q9HCK8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CHD8Q9HCK8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.36■■□□□ 1.33
CHD8Q9HCK8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD8Q9HCK8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHD8Q9HCK8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHD8Q9HCK8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD8Q9HCK8 AC092028.1-203ENST00000608262 953 ntBASIC23.35■■□□□ 1.33
CHD8Q9HCK8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.35■■□□□ 1.33
CHD8Q9HCK8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.35■■□□□ 1.33
CHD8Q9HCK8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.35■■□□□ 1.33
CHD8Q9HCK8 AC142381.2-201ENST00000566120 298 ntBASIC23.35■■□□□ 1.33
CHD8Q9HCK8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD8Q9HCK8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD8Q9HCK8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD8Q9HCK8 AL117332.1-201ENST00000622628 974 ntBASIC23.34■■□□□ 1.33
CHD8Q9HCK8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD8Q9HCK8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD8Q9HCK8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD8Q9HCK8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHD8Q9HCK8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHD8Q9HCK8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 RPS2P7-201ENST00000447334 885 ntBASIC23.32■■□□□ 1.32
CHD8Q9HCK8 AL031432.3-201ENST00000607698 485 ntBASIC23.32■■□□□ 1.32
CHD8Q9HCK8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.32■■□□□ 1.32
CHD8Q9HCK8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.31■■□□□ 1.32
CHD8Q9HCK8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD8Q9HCK8 MIR6821-201ENST00000617625 74 ntBASIC23.3■■□□□ 1.32
CHD8Q9HCK8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD8Q9HCK8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD8Q9HCK8 ESRRAP2-201ENST00000418437 1549 ntBASIC23.29■■□□□ 1.32
CHD8Q9HCK8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD8Q9HCK8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD8Q9HCK8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD8Q9HCK8 AC021242.3-201ENST00000607598 1377 ntBASIC23.28■■□□□ 1.32
CHD8Q9HCK8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 AL512631.2-201ENST00000604634 923 ntBASIC23.28■■□□□ 1.32
CHD8Q9HCK8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD8Q9HCK8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD8Q9HCK8 AC137630.3-201ENST00000607245 391 ntBASIC23.26■■□□□ 1.31
CHD8Q9HCK8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CHD8Q9HCK8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD8Q9HCK8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD8Q9HCK8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD8Q9HCK8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD8Q9HCK8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CHD8Q9HCK8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD8Q9HCK8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CHD8Q9HCK8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD8Q9HCK8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD8Q9HCK8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CHD8Q9HCK8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms