Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.52■■■□□ 2.16
EFCC1Q9HA90 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
EFCC1Q9HA90 AP002414.2-202ENST00000590929 1450 ntBASIC28.52■■■□□ 2.16
EFCC1Q9HA90 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.51■■■□□ 2.15
EFCC1Q9HA90 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
EFCC1Q9HA90 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.5■■■□□ 2.15
EFCC1Q9HA90 Z92544.1-202ENST00000571933 1220 ntBASIC28.5■■■□□ 2.15
EFCC1Q9HA90 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
EFCC1Q9HA90 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
EFCC1Q9HA90 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
EFCC1Q9HA90 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
EFCC1Q9HA90 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.49■■■□□ 2.15
EFCC1Q9HA90 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
EFCC1Q9HA90 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.47■■■□□ 2.15
EFCC1Q9HA90 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
EFCC1Q9HA90 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
EFCC1Q9HA90 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.46■■■□□ 2.15
EFCC1Q9HA90 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
EFCC1Q9HA90 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
EFCC1Q9HA90 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
EFCC1Q9HA90 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
EFCC1Q9HA90 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.45■■■□□ 2.14
EFCC1Q9HA90 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.45■■■□□ 2.14
EFCC1Q9HA90 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
EFCC1Q9HA90 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.44■■■□□ 2.14
EFCC1Q9HA90 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.44■■■□□ 2.14
EFCC1Q9HA90 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.44■■■□□ 2.14
EFCC1Q9HA90 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
EFCC1Q9HA90 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
EFCC1Q9HA90 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
EFCC1Q9HA90 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
EFCC1Q9HA90 MIR638-201ENST00000385237 100 ntBASIC28.43■■■□□ 2.14
EFCC1Q9HA90 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.43■■■□□ 2.14
EFCC1Q9HA90 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
EFCC1Q9HA90 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
EFCC1Q9HA90 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.42■■■□□ 2.14
EFCC1Q9HA90 AC019171.1-201ENST00000601251 1056 ntBASIC28.42■■■□□ 2.14
EFCC1Q9HA90 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.42■■■□□ 2.14
EFCC1Q9HA90 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.42■■■□□ 2.14
EFCC1Q9HA90 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
EFCC1Q9HA90 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
EFCC1Q9HA90 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.41■■■□□ 2.14
EFCC1Q9HA90 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
EFCC1Q9HA90 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
EFCC1Q9HA90 AC135731.1-201ENST00000569415 2548 ntBASIC28.4■■■□□ 2.14
EFCC1Q9HA90 AL359504.2-201ENST00000605506 1601 ntBASIC28.4■■■□□ 2.14
EFCC1Q9HA90 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
EFCC1Q9HA90 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
EFCC1Q9HA90 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
EFCC1Q9HA90 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
EFCC1Q9HA90 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.38■■■□□ 2.13
EFCC1Q9HA90 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.38■■■□□ 2.13
EFCC1Q9HA90 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.38■■■□□ 2.13
EFCC1Q9HA90 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
EFCC1Q9HA90 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
EFCC1Q9HA90 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
EFCC1Q9HA90 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.37■■■□□ 2.13
EFCC1Q9HA90 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
EFCC1Q9HA90 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
EFCC1Q9HA90 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.36■■■□□ 2.13
EFCC1Q9HA90 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
EFCC1Q9HA90 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
EFCC1Q9HA90 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.36■■■□□ 2.13
EFCC1Q9HA90 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
EFCC1Q9HA90 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EFCC1Q9HA90 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EFCC1Q9HA90 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
EFCC1Q9HA90 KRT125P-201ENST00000546827 989 ntBASIC28.34■■■□□ 2.13
EFCC1Q9HA90 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
EFCC1Q9HA90 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
EFCC1Q9HA90 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.32■■■□□ 2.12
EFCC1Q9HA90 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
EFCC1Q9HA90 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.32■■■□□ 2.12
EFCC1Q9HA90 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.32■■■□□ 2.12
EFCC1Q9HA90 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
EFCC1Q9HA90 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.31■■■□□ 2.12
EFCC1Q9HA90 MIR4787-201ENST00000607364 84 ntBASIC28.31■■■□□ 2.12
EFCC1Q9HA90 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.31■■■□□ 2.12
EFCC1Q9HA90 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
EFCC1Q9HA90 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
EFCC1Q9HA90 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
EFCC1Q9HA90 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
EFCC1Q9HA90 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
EFCC1Q9HA90 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
EFCC1Q9HA90 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
EFCC1Q9HA90 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.3■■■□□ 2.12
EFCC1Q9HA90 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
EFCC1Q9HA90 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms