Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.44■■□□□ 1.82
CDH23Q9H251 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDH23Q9H251 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
CDH23Q9H251 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDH23Q9H251 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDH23Q9H251 ZNRF2P3-201ENST00000424200 374 ntBASIC26.43■■□□□ 1.82
CDH23Q9H251 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CDH23Q9H251 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.42■■□□□ 1.82
CDH23Q9H251 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDH23Q9H251 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CDH23Q9H251 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDH23Q9H251 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.42■■□□□ 1.82
CDH23Q9H251 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDH23Q9H251 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDH23Q9H251 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDH23Q9H251 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CDH23Q9H251 AC026271.2-201ENST00000428091 497 ntBASIC26.41■■□□□ 1.82
CDH23Q9H251 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.41■■□□□ 1.82
CDH23Q9H251 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CDH23Q9H251 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDH23Q9H251 KRT16P3-201ENST00000439127 1283 ntBASIC26.4■■□□□ 1.82
CDH23Q9H251 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDH23Q9H251 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDH23Q9H251 AL136116.3-201ENST00000402907 1138 ntBASIC26.39■■□□□ 1.82
CDH23Q9H251 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.39■■□□□ 1.82
CDH23Q9H251 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
CDH23Q9H251 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CDH23Q9H251 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDH23Q9H251 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.39■■□□□ 1.81
CDH23Q9H251 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDH23Q9H251 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.38■■□□□ 1.81
CDH23Q9H251 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
CDH23Q9H251 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.38■■□□□ 1.81
CDH23Q9H251 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CDH23Q9H251 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDH23Q9H251 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CDH23Q9H251 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.37■■□□□ 1.81
CDH23Q9H251 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDH23Q9H251 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.37■■□□□ 1.81
CDH23Q9H251 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDH23Q9H251 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CDH23Q9H251 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CDH23Q9H251 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.36■■□□□ 1.81
CDH23Q9H251 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CDH23Q9H251 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDH23Q9H251 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDH23Q9H251 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.35■■□□□ 1.81
CDH23Q9H251 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.35■■□□□ 1.81
CDH23Q9H251 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.35■■□□□ 1.81
CDH23Q9H251 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.35■■□□□ 1.81
CDH23Q9H251 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CDH23Q9H251 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.35■■□□□ 1.81
CDH23Q9H251 MIR4466-201ENST00000606121 54 ntBASIC26.35■■□□□ 1.81
CDH23Q9H251 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDH23Q9H251 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.34■■□□□ 1.81
CDH23Q9H251 AC133561.4-201ENST00000566112 224 ntBASIC26.33■■□□□ 1.81
CDH23Q9H251 AL359504.2-201ENST00000605506 1601 ntBASIC26.33■■□□□ 1.81
CDH23Q9H251 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDH23Q9H251 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH23Q9H251 AC096631.2-201ENST00000436136 790 ntBASIC26.32■■□□□ 1.8
CDH23Q9H251 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.32■■□□□ 1.8
CDH23Q9H251 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CDH23Q9H251 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.32■■□□□ 1.8
CDH23Q9H251 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH23Q9H251 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.32■■□□□ 1.8
CDH23Q9H251 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDH23Q9H251 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDH23Q9H251 ST7-AS1-201ENST00000456775 1889 ntBASIC26.32■■□□□ 1.8
CDH23Q9H251 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDH23Q9H251 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.31■■□□□ 1.8
CDH23Q9H251 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDH23Q9H251 AC104564.3-201ENST00000582367 638 ntBASIC26.31■■□□□ 1.8
CDH23Q9H251 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CDH23Q9H251 BX664725.1-201ENST00000438252 379 ntBASIC26.3■■□□□ 1.8
CDH23Q9H251 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.3■■□□□ 1.8
CDH23Q9H251 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.3■■□□□ 1.8
CDH23Q9H251 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDH23Q9H251 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.3■■□□□ 1.8
CDH23Q9H251 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.29■■□□□ 1.8
CDH23Q9H251 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDH23Q9H251 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDH23Q9H251 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDH23Q9H251 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CDH23Q9H251 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.28■■□□□ 1.8
CDH23Q9H251 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
CDH23Q9H251 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDH23Q9H251 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDH23Q9H251 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDH23Q9H251 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDH23Q9H251 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDH23Q9H251 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDH23Q9H251 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.27■■□□□ 1.8
CDH23Q9H251 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.27■■□□□ 1.8
CDH23Q9H251 MIR5787-201ENST00000611784 55 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms