Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXC2Q99958 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXC2Q99958 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXC2Q99958 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXC2Q99958 AC100797.4-201ENST00000631653 1827 ntBASIC20.73■□□□□ 0.91
FOXC2Q99958 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FOXC2Q99958 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXC2Q99958 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FOXC2Q99958 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXC2Q99958 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXC2Q99958 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
FOXC2Q99958 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
FOXC2Q99958 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.7■□□□□ 0.9
FOXC2Q99958 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXC2Q99958 RPS2P7-201ENST00000447334 885 ntBASIC20.69■□□□□ 0.9
FOXC2Q99958 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXC2Q99958 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXC2Q99958 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXC2Q99958 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXC2Q99958 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXC2Q99958 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXC2Q99958 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXC2Q99958 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXC2Q99958 AC022616.5-201ENST00000518796 181 ntBASIC20.68■□□□□ 0.9
FOXC2Q99958 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXC2Q99958 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXC2Q99958 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXC2Q99958 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXC2Q99958 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXC2Q99958 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXC2Q99958 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXC2Q99958 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXC2Q99958 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXC2Q99958 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXC2Q99958 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXC2Q99958 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
FOXC2Q99958 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXC2Q99958 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 AL359504.2-201ENST00000605506 1601 ntBASIC20.66■□□□□ 0.9
FOXC2Q99958 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXC2Q99958 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FOXC2Q99958 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXC2Q99958 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXC2Q99958 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXC2Q99958 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.65■□□□□ 0.9
FOXC2Q99958 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXC2Q99958 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
FOXC2Q99958 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXC2Q99958 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXC2Q99958 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXC2Q99958 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXC2Q99958 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXC2Q99958 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
FOXC2Q99958 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXC2Q99958 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXC2Q99958 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXC2Q99958 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXC2Q99958 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXC2Q99958 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXC2Q99958 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXC2Q99958 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXC2Q99958 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.62■□□□□ 0.89
FOXC2Q99958 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXC2Q99958 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXC2Q99958 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXC2Q99958 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXC2Q99958 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXC2Q99958 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXC2Q99958 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXC2Q99958 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXC2Q99958 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXC2Q99958 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXC2Q99958 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
FOXC2Q99958 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXC2Q99958 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
FOXC2Q99958 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXC2Q99958 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
FOXC2Q99958 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXC2Q99958 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXC2Q99958 KRT18P24-201ENST00000344739 1156 ntBASIC20.59■□□□□ 0.89
FOXC2Q99958 TSPY9P-201ENST00000440215 945 ntBASIC20.59■□□□□ 0.89
FOXC2Q99958 TSPY11P-201ENST00000442607 1045 ntBASIC20.59■□□□□ 0.89
FOXC2Q99958 AC131281.2-201ENST00000520478 145 ntBASIC20.59■□□□□ 0.89
FOXC2Q99958 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXC2Q99958 AC137630.3-201ENST00000607245 391 ntBASIC20.59■□□□□ 0.89
FOXC2Q99958 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXC2Q99958 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXC2Q99958 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXC2Q99958 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXC2Q99958 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXC2Q99958 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.58■□□□□ 0.89
FOXC2Q99958 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
FOXC2Q99958 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXC2Q99958 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms