Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARXQ96QS3 MIR638-201ENST00000385237 100 ntBASIC31.87■■■□□ 2.69
ARXQ96QS3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.87■■■□□ 2.69
ARXQ96QS3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARXQ96QS3 AC093536.1-201ENST00000569153 554 ntBASIC31.85■■■□□ 2.69
ARXQ96QS3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
ARXQ96QS3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.84■■■□□ 2.69
ARXQ96QS3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ARXQ96QS3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARXQ96QS3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARXQ96QS3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
ARXQ96QS3 AC239859.2-201ENST00000444165 318 ntBASIC31.83■■■□□ 2.69
ARXQ96QS3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.83■■■□□ 2.69
ARXQ96QS3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ARXQ96QS3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.82■■■□□ 2.68
ARXQ96QS3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARXQ96QS3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARXQ96QS3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
ARXQ96QS3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
ARXQ96QS3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
ARXQ96QS3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.81■■■□□ 2.68
ARXQ96QS3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
ARXQ96QS3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.8■■■□□ 2.68
ARXQ96QS3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARXQ96QS3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARXQ96QS3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.8■■■□□ 2.68
ARXQ96QS3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARXQ96QS3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.79■■■□□ 2.68
ARXQ96QS3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
ARXQ96QS3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.79■■■□□ 2.68
ARXQ96QS3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ARXQ96QS3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARXQ96QS3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.78■■■□□ 2.68
ARXQ96QS3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.78■■■□□ 2.68
ARXQ96QS3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARXQ96QS3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.78■■■□□ 2.68
ARXQ96QS3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ARXQ96QS3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ARXQ96QS3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
ARXQ96QS3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
ARXQ96QS3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
ARXQ96QS3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
ARXQ96QS3 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.76■■■□□ 2.67
ARXQ96QS3 AC018755.3-202ENST00000596210 929 ntBASIC31.76■■■□□ 2.67
ARXQ96QS3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ARXQ96QS3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ARXQ96QS3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARXQ96QS3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.75■■■□□ 2.67
ARXQ96QS3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.75■■■□□ 2.67
ARXQ96QS3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
ARXQ96QS3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.75■■■□□ 2.67
ARXQ96QS3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.75■■■□□ 2.67
ARXQ96QS3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.74■■■□□ 2.67
ARXQ96QS3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARXQ96QS3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARXQ96QS3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARXQ96QS3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.73■■■□□ 2.67
ARXQ96QS3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.73■■■□□ 2.67
ARXQ96QS3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
ARXQ96QS3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.73■■■□□ 2.67
ARXQ96QS3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.73■■■□□ 2.67
ARXQ96QS3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
ARXQ96QS3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.72■■■□□ 2.67
ARXQ96QS3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.72■■■□□ 2.67
ARXQ96QS3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARXQ96QS3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARXQ96QS3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ARXQ96QS3 AP002414.2-202ENST00000590929 1450 ntBASIC31.71■■■□□ 2.67
ARXQ96QS3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.7■■■□□ 2.67
ARXQ96QS3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.7■■■□□ 2.67
ARXQ96QS3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
ARXQ96QS3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARXQ96QS3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
ARXQ96QS3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARXQ96QS3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARXQ96QS3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ARXQ96QS3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.68■■■□□ 2.66
ARXQ96QS3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ARXQ96QS3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ARXQ96QS3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.67■■■□□ 2.66
ARXQ96QS3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
ARXQ96QS3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARXQ96QS3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARXQ96QS3 Z92544.1-202ENST00000571933 1220 ntBASIC31.66■■■□□ 2.66
ARXQ96QS3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.66■■■□□ 2.66
ARXQ96QS3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.65■■■□□ 2.66
ARXQ96QS3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.65■■■□□ 2.66
ARXQ96QS3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARXQ96QS3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARXQ96QS3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.64■■■□□ 2.66
ARXQ96QS3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.64■■■□□ 2.66
ARXQ96QS3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
ARXQ96QS3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARXQ96QS3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.63■■■□□ 2.65
ARXQ96QS3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.63■■■□□ 2.65
ARXQ96QS3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARXQ96QS3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARXQ96QS3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ARXQ96QS3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.62■■■□□ 2.65
ARXQ96QS3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms