Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDLIM5Q96HC4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDLIM5Q96HC4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDLIM5Q96HC4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM5Q96HC4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.91■■□□□ 1.42
PDLIM5Q96HC4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM5Q96HC4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.91■■□□□ 1.42
PDLIM5Q96HC4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM5Q96HC4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDLIM5Q96HC4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDLIM5Q96HC4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDLIM5Q96HC4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDLIM5Q96HC4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDLIM5Q96HC4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.89■■□□□ 1.42
PDLIM5Q96HC4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PDLIM5Q96HC4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDLIM5Q96HC4 AC010501.1-201ENST00000606270 1962 ntBASIC23.89■■□□□ 1.41
PDLIM5Q96HC4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
PDLIM5Q96HC4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.88■■□□□ 1.41
PDLIM5Q96HC4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM5Q96HC4 AC060814.1-201ENST00000554326 538 ntBASIC23.88■■□□□ 1.41
PDLIM5Q96HC4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM5Q96HC4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM5Q96HC4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PDLIM5Q96HC4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.87■■□□□ 1.41
PDLIM5Q96HC4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM5Q96HC4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM5Q96HC4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.86■■□□□ 1.41
PDLIM5Q96HC4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.86■■□□□ 1.41
PDLIM5Q96HC4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM5Q96HC4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 AL157400.5-201ENST00000507624 621 ntBASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 ERN1-208ENST00000606895 2068 ntBASIC23.85■■□□□ 1.41
PDLIM5Q96HC4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM5Q96HC4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.84■■□□□ 1.41
PDLIM5Q96HC4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM5Q96HC4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PDLIM5Q96HC4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM5Q96HC4 AC135731.1-201ENST00000569415 2548 ntBASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM5Q96HC4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDLIM5Q96HC4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDLIM5Q96HC4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 AC025884.2-201ENST00000553429 711 ntBASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PDLIM5Q96HC4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDLIM5Q96HC4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDLIM5Q96HC4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDLIM5Q96HC4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.81■■□□□ 1.4
PDLIM5Q96HC4 AC092296.2-201ENST00000589470 999 ntBASIC23.81■■□□□ 1.4
PDLIM5Q96HC4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDLIM5Q96HC4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.8■■□□□ 1.4
PDLIM5Q96HC4 MIR4449-201ENST00000578365 66 ntBASIC23.8■■□□□ 1.4
PDLIM5Q96HC4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.8■■□□□ 1.4
PDLIM5Q96HC4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDLIM5Q96HC4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PDLIM5Q96HC4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDLIM5Q96HC4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PDLIM5Q96HC4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM5Q96HC4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM5Q96HC4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDLIM5Q96HC4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.75■■□□□ 1.39
PDLIM5Q96HC4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PDLIM5Q96HC4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms