Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LINC00116Q8NCU8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.54■■■□□ 2.64
LINC00116Q8NCU8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
LINC00116Q8NCU8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LINC00116Q8NCU8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
LINC00116Q8NCU8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.53■■■□□ 2.64
LINC00116Q8NCU8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LINC00116Q8NCU8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LINC00116Q8NCU8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
LINC00116Q8NCU8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.53■■■□□ 2.64
LINC00116Q8NCU8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.52■■■□□ 2.64
LINC00116Q8NCU8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LINC00116Q8NCU8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
LINC00116Q8NCU8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LINC00116Q8NCU8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
LINC00116Q8NCU8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.5■■■□□ 2.63
LINC00116Q8NCU8 WHAMMP3-201ENST00000611636 1609 ntBASIC31.5■■■□□ 2.63
LINC00116Q8NCU8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
LINC00116Q8NCU8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.5■■■□□ 2.63
LINC00116Q8NCU8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LINC00116Q8NCU8 LONRF2P2-201ENST00000439212 571 ntBASIC31.49■■■□□ 2.63
LINC00116Q8NCU8 RPS2P7-201ENST00000447334 885 ntBASIC31.49■■■□□ 2.63
LINC00116Q8NCU8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
LINC00116Q8NCU8 Z92544.1-202ENST00000571933 1220 ntBASIC31.49■■■□□ 2.63
LINC00116Q8NCU8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.49■■■□□ 2.63
LINC00116Q8NCU8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LINC00116Q8NCU8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.48■■■□□ 2.63
LINC00116Q8NCU8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
LINC00116Q8NCU8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.47■■■□□ 2.63
LINC00116Q8NCU8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
LINC00116Q8NCU8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LINC00116Q8NCU8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
LINC00116Q8NCU8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LINC00116Q8NCU8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LINC00116Q8NCU8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LINC00116Q8NCU8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.46■■■□□ 2.63
LINC00116Q8NCU8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.45■■■□□ 2.63
LINC00116Q8NCU8 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.45■■■□□ 2.63
LINC00116Q8NCU8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.45■■■□□ 2.63
LINC00116Q8NCU8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
LINC00116Q8NCU8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.44■■■□□ 2.62
LINC00116Q8NCU8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LINC00116Q8NCU8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
LINC00116Q8NCU8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LINC00116Q8NCU8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.43■■■□□ 2.62
LINC00116Q8NCU8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LINC00116Q8NCU8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.42■■■□□ 2.62
LINC00116Q8NCU8 MIR935-201ENST00000401179 91 ntBASIC31.42■■■□□ 2.62
LINC00116Q8NCU8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
LINC00116Q8NCU8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
LINC00116Q8NCU8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LINC00116Q8NCU8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
LINC00116Q8NCU8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LINC00116Q8NCU8 AC008406.3-201ENST00000620001 1374 ntBASIC31.41■■■□□ 2.62
LINC00116Q8NCU8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LINC00116Q8NCU8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.4■■■□□ 2.62
LINC00116Q8NCU8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LINC00116Q8NCU8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LINC00116Q8NCU8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
LINC00116Q8NCU8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
LINC00116Q8NCU8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.38■■■□□ 2.61
LINC00116Q8NCU8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.38■■■□□ 2.61
LINC00116Q8NCU8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LINC00116Q8NCU8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LINC00116Q8NCU8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LINC00116Q8NCU8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.36■■■□□ 2.61
LINC00116Q8NCU8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LINC00116Q8NCU8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LINC00116Q8NCU8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LINC00116Q8NCU8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
LINC00116Q8NCU8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.34■■■□□ 2.61
LINC00116Q8NCU8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LINC00116Q8NCU8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
LINC00116Q8NCU8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LINC00116Q8NCU8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.33■■■□□ 2.61
LINC00116Q8NCU8 MIR4787-201ENST00000607364 84 ntBASIC31.33■■■□□ 2.61
LINC00116Q8NCU8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
LINC00116Q8NCU8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
LINC00116Q8NCU8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
LINC00116Q8NCU8 UNC93B8-201ENST00000511903 705 ntBASIC31.32■■■□□ 2.6
LINC00116Q8NCU8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LINC00116Q8NCU8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.31■■■□□ 2.6
LINC00116Q8NCU8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
LINC00116Q8NCU8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.31■■■□□ 2.6
LINC00116Q8NCU8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms