Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
AFAP1Q8N556 GRAMD4P7-201ENST00000578182 1232 ntBASIC37.31■■■■□ 3.56
AFAP1Q8N556 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC37.31■■■■□ 3.56
AFAP1Q8N556 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC37.31■■■■□ 3.56
AFAP1Q8N556 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
AFAP1Q8N556 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC37.3■■■■□ 3.56
AFAP1Q8N556 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
AFAP1Q8N556 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC37.3■■■■□ 3.56
AFAP1Q8N556 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
AFAP1Q8N556 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC37.29■■■■□ 3.56
AFAP1Q8N556 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
AFAP1Q8N556 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC37.28■■■■□ 3.56
AFAP1Q8N556 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC37.28■■■■□ 3.56
AFAP1Q8N556 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC37.27■■■■□ 3.56
AFAP1Q8N556 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
AFAP1Q8N556 RPS2P7-201ENST00000447334 885 ntBASIC37.27■■■■□ 3.56
AFAP1Q8N556 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC37.26■■■■□ 3.56
AFAP1Q8N556 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC37.26■■■■□ 3.55
AFAP1Q8N556 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC37.25■■■■□ 3.55
AFAP1Q8N556 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC37.24■■■■□ 3.55
AFAP1Q8N556 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC37.24■■■■□ 3.55
AFAP1Q8N556 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
AFAP1Q8N556 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
AFAP1Q8N556 PEMT-206ENST00000435340 960 ntTSL 5 BASIC37.23■■■■□ 3.55
AFAP1Q8N556 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC37.22■■■■□ 3.55
AFAP1Q8N556 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC37.22■■■■□ 3.55
AFAP1Q8N556 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
AFAP1Q8N556 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC37.22■■■■□ 3.55
AFAP1Q8N556 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
AFAP1Q8N556 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
AFAP1Q8N556 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC37.21■■■■□ 3.55
AFAP1Q8N556 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
AFAP1Q8N556 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
AFAP1Q8N556 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
AFAP1Q8N556 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC37.21■■■■□ 3.55
AFAP1Q8N556 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
AFAP1Q8N556 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC37.21■■■■□ 3.55
AFAP1Q8N556 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC37.2■■■■□ 3.55
AFAP1Q8N556 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
AFAP1Q8N556 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC37.2■■■■□ 3.55
AFAP1Q8N556 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
AFAP1Q8N556 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
AFAP1Q8N556 WHAMMP3-201ENST00000611636 1609 ntBASIC37.19■■■■□ 3.54
AFAP1Q8N556 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
AFAP1Q8N556 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
AFAP1Q8N556 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC37.19■■■■□ 3.54
AFAP1Q8N556 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC37.19■■■■□ 3.54
AFAP1Q8N556 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC37.19■■■■□ 3.54
AFAP1Q8N556 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
AFAP1Q8N556 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
AFAP1Q8N556 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC37.18■■■■□ 3.54
AFAP1Q8N556 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
AFAP1Q8N556 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
AFAP1Q8N556 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
AFAP1Q8N556 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC37.17■■■■□ 3.54
AFAP1Q8N556 UNC93B8-201ENST00000511903 705 ntBASIC37.17■■■■□ 3.54
AFAP1Q8N556 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
AFAP1Q8N556 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
AFAP1Q8N556 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
AFAP1Q8N556 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
AFAP1Q8N556 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
AFAP1Q8N556 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
AFAP1Q8N556 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC37.15■■■■□ 3.54
AFAP1Q8N556 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC37.15■■■■□ 3.54
AFAP1Q8N556 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC37.15■■■■□ 3.54
AFAP1Q8N556 MIR4787-201ENST00000607364 84 ntBASIC37.15■■■■□ 3.54
AFAP1Q8N556 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC37.15■■■■□ 3.54
AFAP1Q8N556 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC37.15■■■■□ 3.54
AFAP1Q8N556 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
AFAP1Q8N556 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC37.14■■■■□ 3.54
AFAP1Q8N556 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC37.14■■■■□ 3.54
AFAP1Q8N556 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
AFAP1Q8N556 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
AFAP1Q8N556 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC37.13■■■■□ 3.53
AFAP1Q8N556 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC37.13■■■■□ 3.53
AFAP1Q8N556 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
AFAP1Q8N556 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
AFAP1Q8N556 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
AFAP1Q8N556 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC37.12■■■■□ 3.53
AFAP1Q8N556 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC37.12■■■■□ 3.53
AFAP1Q8N556 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
AFAP1Q8N556 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC37.12■■■■□ 3.53
AFAP1Q8N556 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
AFAP1Q8N556 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
AFAP1Q8N556 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC37.11■■■■□ 3.53
AFAP1Q8N556 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC37.11■■■■□ 3.53
AFAP1Q8N556 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC37.11■■■■□ 3.53
AFAP1Q8N556 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC37.1■■■■□ 3.53
AFAP1Q8N556 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
AFAP1Q8N556 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
AFAP1Q8N556 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC37.09■■■■□ 3.53
AFAP1Q8N556 MIR638-201ENST00000385237 100 ntBASIC37.09■■■■□ 3.53
AFAP1Q8N556 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC37.09■■■■□ 3.53
AFAP1Q8N556 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
AFAP1Q8N556 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
AFAP1Q8N556 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC37.07■■■■□ 3.52
AFAP1Q8N556 KRT125P-201ENST00000546827 989 ntBASIC37.07■■■■□ 3.52
AFAP1Q8N556 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC37.07■■■■□ 3.52
AFAP1Q8N556 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC37.06■■■■□ 3.52
AFAP1Q8N556 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms