Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLX4Q8IY92 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SLX4Q8IY92 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.37■■■□□ 2.45
SLX4Q8IY92 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.37■■■□□ 2.45
SLX4Q8IY92 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.36■■■□□ 2.45
SLX4Q8IY92 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.36■■■□□ 2.45
SLX4Q8IY92 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLX4Q8IY92 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SLX4Q8IY92 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLX4Q8IY92 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLX4Q8IY92 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SLX4Q8IY92 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SLX4Q8IY92 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.35■■■□□ 2.45
SLX4Q8IY92 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
SLX4Q8IY92 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SLX4Q8IY92 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
SLX4Q8IY92 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.35■■■□□ 2.45
SLX4Q8IY92 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLX4Q8IY92 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
SLX4Q8IY92 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLX4Q8IY92 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLX4Q8IY92 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.34■■■□□ 2.45
SLX4Q8IY92 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLX4Q8IY92 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SLX4Q8IY92 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.33■■■□□ 2.45
SLX4Q8IY92 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLX4Q8IY92 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLX4Q8IY92 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLX4Q8IY92 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.33■■■□□ 2.45
SLX4Q8IY92 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLX4Q8IY92 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SLX4Q8IY92 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLX4Q8IY92 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
SLX4Q8IY92 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLX4Q8IY92 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLX4Q8IY92 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.31■■■□□ 2.44
SLX4Q8IY92 RPS2P7-201ENST00000447334 885 ntBASIC30.31■■■□□ 2.44
SLX4Q8IY92 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
SLX4Q8IY92 AC008406.3-201ENST00000620001 1374 ntBASIC30.31■■■□□ 2.44
SLX4Q8IY92 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLX4Q8IY92 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLX4Q8IY92 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.3■■■□□ 2.44
SLX4Q8IY92 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
SLX4Q8IY92 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLX4Q8IY92 UNC93B8-201ENST00000511903 705 ntBASIC30.3■■■□□ 2.44
SLX4Q8IY92 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SLX4Q8IY92 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.29■■■□□ 2.44
SLX4Q8IY92 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLX4Q8IY92 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLX4Q8IY92 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.29■■■□□ 2.44
SLX4Q8IY92 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLX4Q8IY92 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.28■■■□□ 2.44
SLX4Q8IY92 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
SLX4Q8IY92 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLX4Q8IY92 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SLX4Q8IY92 MIR4787-201ENST00000607364 84 ntBASIC30.26■■■□□ 2.44
SLX4Q8IY92 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.26■■■□□ 2.44
SLX4Q8IY92 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.26■■■□□ 2.43
SLX4Q8IY92 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SLX4Q8IY92 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SLX4Q8IY92 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.25■■■□□ 2.43
SLX4Q8IY92 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
SLX4Q8IY92 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SLX4Q8IY92 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SLX4Q8IY92 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.25■■■□□ 2.43
SLX4Q8IY92 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SLX4Q8IY92 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
SLX4Q8IY92 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
SLX4Q8IY92 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.24■■■□□ 2.43
SLX4Q8IY92 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SLX4Q8IY92 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SLX4Q8IY92 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.24■■■□□ 2.43
SLX4Q8IY92 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.24■■■□□ 2.43
SLX4Q8IY92 KRT16P3-201ENST00000439127 1283 ntBASIC30.24■■■□□ 2.43
SLX4Q8IY92 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
SLX4Q8IY92 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SLX4Q8IY92 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
SLX4Q8IY92 LONRF2P2-201ENST00000439212 571 ntBASIC30.23■■■□□ 2.43
SLX4Q8IY92 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
SLX4Q8IY92 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLX4Q8IY92 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLX4Q8IY92 BX664725.1-201ENST00000438252 379 ntBASIC30.22■■■□□ 2.43
SLX4Q8IY92 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.22■■■□□ 2.43
SLX4Q8IY92 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLX4Q8IY92 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLX4Q8IY92 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
SLX4Q8IY92 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLX4Q8IY92 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.21■■■□□ 2.43
SLX4Q8IY92 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SLX4Q8IY92 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SLX4Q8IY92 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.21■■■□□ 2.43
SLX4Q8IY92 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.2■■■□□ 2.43
SLX4Q8IY92 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLX4Q8IY92 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLX4Q8IY92 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLX4Q8IY92 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SLX4Q8IY92 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.2■■■□□ 2.42
SLX4Q8IY92 MIR638-201ENST00000385237 100 ntBASIC30.19■■■□□ 2.42
SLX4Q8IY92 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SLX4Q8IY92 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms