Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD1LQ86WJ1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD1LQ86WJ1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CHD1LQ86WJ1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.22■■■□□ 2.43
CHD1LQ86WJ1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.21■■■□□ 2.43
CHD1LQ86WJ1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1LQ86WJ1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.21■■■□□ 2.43
CHD1LQ86WJ1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.21■■■□□ 2.43
CHD1LQ86WJ1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHD1LQ86WJ1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CHD1LQ86WJ1 AC010501.1-201ENST00000606270 1962 ntBASIC30.19■■■□□ 2.42
CHD1LQ86WJ1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1LQ86WJ1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1LQ86WJ1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1LQ86WJ1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CHD1LQ86WJ1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.18■■■□□ 2.42
CHD1LQ86WJ1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.18■■■□□ 2.42
CHD1LQ86WJ1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.18■■■□□ 2.42
CHD1LQ86WJ1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD1LQ86WJ1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHD1LQ86WJ1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHD1LQ86WJ1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHD1LQ86WJ1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1LQ86WJ1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1LQ86WJ1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1LQ86WJ1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1LQ86WJ1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1LQ86WJ1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1LQ86WJ1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHD1LQ86WJ1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.15■■■□□ 2.42
CHD1LQ86WJ1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.15■■■□□ 2.42
CHD1LQ86WJ1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHD1LQ86WJ1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CHD1LQ86WJ1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD1LQ86WJ1 AC126177.7-201ENST00000547904 679 ntBASIC30.14■■■□□ 2.42
CHD1LQ86WJ1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
CHD1LQ86WJ1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1LQ86WJ1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1LQ86WJ1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1LQ86WJ1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.13■■■□□ 2.41
CHD1LQ86WJ1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1LQ86WJ1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1LQ86WJ1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1LQ86WJ1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.12■■■□□ 2.41
CHD1LQ86WJ1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1LQ86WJ1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1LQ86WJ1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CHD1LQ86WJ1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1LQ86WJ1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.1■■■□□ 2.41
CHD1LQ86WJ1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD1LQ86WJ1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CHD1LQ86WJ1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1LQ86WJ1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CHD1LQ86WJ1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD1LQ86WJ1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHD1LQ86WJ1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.08■■■□□ 2.41
CHD1LQ86WJ1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
CHD1LQ86WJ1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHD1LQ86WJ1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.07■■■□□ 2.4
CHD1LQ86WJ1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.07■■■□□ 2.4
CHD1LQ86WJ1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.07■■■□□ 2.4
CHD1LQ86WJ1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHD1LQ86WJ1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHD1LQ86WJ1 MIR639-201ENST00000384974 98 ntBASIC30.06■■■□□ 2.4
CHD1LQ86WJ1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CHD1LQ86WJ1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHD1LQ86WJ1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.05■■■□□ 2.4
CHD1LQ86WJ1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CHD1LQ86WJ1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
CHD1LQ86WJ1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHD1LQ86WJ1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 AC096887.2-201ENST00000623443 1957 ntBASIC30.04■■■□□ 2.4
CHD1LQ86WJ1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHD1LQ86WJ1 AC135731.1-201ENST00000569415 2548 ntBASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 AL157400.5-201ENST00000507624 621 ntBASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.02■■■□□ 2.4
CHD1LQ86WJ1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.01■■■□□ 2.39
CHD1LQ86WJ1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHD1LQ86WJ1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms