Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.33■□□□□ 0.85
ZNF880Q6PDB4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF880Q6PDB4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF880Q6PDB4 ERN1-208ENST00000606895 2068 ntBASIC20.33■□□□□ 0.84
ZNF880Q6PDB4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.33■□□□□ 0.84
ZNF880Q6PDB4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF880Q6PDB4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 HLA-V-202ENST00000446817 847 ntBASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF880Q6PDB4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF880Q6PDB4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF880Q6PDB4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF880Q6PDB4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF880Q6PDB4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF880Q6PDB4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF880Q6PDB4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNF880Q6PDB4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF880Q6PDB4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF880Q6PDB4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF880Q6PDB4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF880Q6PDB4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF880Q6PDB4 ZNRF2P2-203ENST00000454624 420 ntBASIC20.28■□□□□ 0.84
ZNF880Q6PDB4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF880Q6PDB4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF880Q6PDB4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF880Q6PDB4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF880Q6PDB4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.26■□□□□ 0.83
ZNF880Q6PDB4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZNF880Q6PDB4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF880Q6PDB4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 AL359258.2-201ENST00000564063 1566 ntBASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF880Q6PDB4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ZNF880Q6PDB4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF880Q6PDB4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.24■□□□□ 0.83
ZNF880Q6PDB4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF880Q6PDB4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF880Q6PDB4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZNF880Q6PDB4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF880Q6PDB4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 AL359504.2-201ENST00000605506 1601 ntBASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF880Q6PDB4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZNF880Q6PDB4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF880Q6PDB4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF880Q6PDB4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF880Q6PDB4 CR559946.2-201ENST00000623684 991 ntBASIC20.2■□□□□ 0.82
ZNF880Q6PDB4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ZNF880Q6PDB4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF880Q6PDB4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF880Q6PDB4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
ZNF880Q6PDB4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF880Q6PDB4 AC096887.2-201ENST00000623443 1957 ntBASIC20.19■□□□□ 0.82
ZNF880Q6PDB4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF880Q6PDB4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms