Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRTCAP3Q53RY4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRTCAP3Q53RY4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRTCAP3Q53RY4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRTCAP3Q53RY4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.98■■□□□ 1.11
KRTCAP3Q53RY4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.98■■□□□ 1.11
KRTCAP3Q53RY4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRTCAP3Q53RY4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRTCAP3Q53RY4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
KRTCAP3Q53RY4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
KRTCAP3Q53RY4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.97■■□□□ 1.11
KRTCAP3Q53RY4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRTCAP3Q53RY4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRTCAP3Q53RY4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRTCAP3Q53RY4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRTCAP3Q53RY4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.96■■□□□ 1.11
KRTCAP3Q53RY4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 AL031848.2-201ENST00000607670 837 ntBASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRTCAP3Q53RY4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 RPS2P7-201ENST00000447334 885 ntBASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 AC103724.3-201ENST00000564481 992 ntBASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
KRTCAP3Q53RY4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRTCAP3Q53RY4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KRTCAP3Q53RY4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KRTCAP3Q53RY4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRTCAP3Q53RY4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.93■■□□□ 1.1
KRTCAP3Q53RY4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
KRTCAP3Q53RY4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRTCAP3Q53RY4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRTCAP3Q53RY4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.91■■□□□ 1.1
KRTCAP3Q53RY4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KRTCAP3Q53RY4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
KRTCAP3Q53RY4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
KRTCAP3Q53RY4 LONRF2P2-201ENST00000439212 571 ntBASIC21.89■■□□□ 1.09
KRTCAP3Q53RY4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.89■■□□□ 1.09
KRTCAP3Q53RY4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRTCAP3Q53RY4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRTCAP3Q53RY4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
KRTCAP3Q53RY4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRTCAP3Q53RY4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 GUSBP5-201ENST00000418136 578 ntBASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.88■■□□□ 1.09
KRTCAP3Q53RY4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
KRTCAP3Q53RY4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
KRTCAP3Q53RY4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
KRTCAP3Q53RY4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.87■■□□□ 1.09
KRTCAP3Q53RY4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
KRTCAP3Q53RY4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 AL449106.1-201ENST00000608517 1980 ntBASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRTCAP3Q53RY4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 AC022616.5-201ENST00000518796 181 ntBASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 DRD5P2-201ENST00000421395 2012 ntBASIC21.85■■□□□ 1.09
KRTCAP3Q53RY4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms