Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB5CP51148 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB5CP51148 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB5CP51148 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAB5CP51148 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB5CP51148 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5CP51148 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5CP51148 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB5CP51148 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB5CP51148 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5CP51148 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB5CP51148 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB5CP51148 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB5CP51148 AC142472.1-201ENST00000612013 1741 ntBASIC19.5■□□□□ 0.71
RAB5CP51148 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB5CP51148 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
RAB5CP51148 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB5CP51148 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB5CP51148 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5CP51148 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5CP51148 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5CP51148 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB5CP51148 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5CP51148 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5CP51148 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5CP51148 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5CP51148 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5CP51148 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB5CP51148 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
RAB5CP51148 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RAB5CP51148 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB5CP51148 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5CP51148 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5CP51148 AL133380.1-201ENST00000506013 324 ntBASIC19.46■□□□□ 0.71
RAB5CP51148 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5CP51148 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5CP51148 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5CP51148 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB5CP51148 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB5CP51148 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5CP51148 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5CP51148 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB5CP51148 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB5CP51148 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB5CP51148 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB5CP51148 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RAB5CP51148 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAB5CP51148 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB5CP51148 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5CP51148 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RAB5CP51148 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5CP51148 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB5CP51148 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5CP51148 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB5CP51148 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
RAB5CP51148 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB5CP51148 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB5CP51148 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RAB5CP51148 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB5CP51148 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB5CP51148 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB5CP51148 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RAB5CP51148 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB5CP51148 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB5CP51148 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB5CP51148 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB5CP51148 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB5CP51148 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB5CP51148 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAB5CP51148 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms