Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
THBS3P49746 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
THBS3P49746 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.97■□□□□ 0.79
THBS3P49746 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.97■□□□□ 0.79
THBS3P49746 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
THBS3P49746 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
THBS3P49746 MIR219A2-201ENST00000608502 1504 ntBASIC19.97■□□□□ 0.79
THBS3P49746 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
THBS3P49746 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
THBS3P49746 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
THBS3P49746 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
THBS3P49746 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.95■□□□□ 0.78
THBS3P49746 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.95■□□□□ 0.78
THBS3P49746 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
THBS3P49746 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
THBS3P49746 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THBS3P49746 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
THBS3P49746 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
THBS3P49746 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
THBS3P49746 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THBS3P49746 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THBS3P49746 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
THBS3P49746 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
THBS3P49746 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
THBS3P49746 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THBS3P49746 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.93■□□□□ 0.78
THBS3P49746 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.93■□□□□ 0.78
THBS3P49746 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THBS3P49746 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THBS3P49746 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.93■□□□□ 0.78
THBS3P49746 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
THBS3P49746 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
THBS3P49746 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
THBS3P49746 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
THBS3P49746 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
THBS3P49746 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
THBS3P49746 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS3P49746 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS3P49746 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS3P49746 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS3P49746 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS3P49746 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.91■□□□□ 0.78
THBS3P49746 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS3P49746 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.9■□□□□ 0.78
THBS3P49746 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THBS3P49746 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
THBS3P49746 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS3P49746 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS3P49746 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
THBS3P49746 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS3P49746 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS3P49746 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS3P49746 HSD17B1P1-201ENST00000590052 955 ntBASIC19.89■□□□□ 0.77
THBS3P49746 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS3P49746 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS3P49746 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THBS3P49746 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS3P49746 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS3P49746 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS3P49746 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THBS3P49746 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS3P49746 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
THBS3P49746 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.87■□□□□ 0.77
THBS3P49746 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS3P49746 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.86■□□□□ 0.77
THBS3P49746 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS3P49746 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS3P49746 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.86■□□□□ 0.77
THBS3P49746 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS3P49746 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.86■□□□□ 0.77
THBS3P49746 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS3P49746 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THBS3P49746 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.86■□□□□ 0.77
THBS3P49746 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
THBS3P49746 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS3P49746 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
THBS3P49746 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.85■□□□□ 0.77
THBS3P49746 AL359258.2-201ENST00000564063 1566 ntBASIC19.85■□□□□ 0.77
THBS3P49746 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS3P49746 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS3P49746 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.85■□□□□ 0.77
THBS3P49746 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
THBS3P49746 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS3P49746 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS3P49746 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS3P49746 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.84■□□□□ 0.77
THBS3P49746 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.84■□□□□ 0.77
THBS3P49746 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
THBS3P49746 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
THBS3P49746 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.84■□□□□ 0.77
THBS3P49746 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
THBS3P49746 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
THBS3P49746 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms