Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATF1P18846 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF1P18846 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
ATF1P18846 AC010501.1-201ENST00000606270 1962 ntBASIC21.27■■□□□ 1
ATF1P18846 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.27■■□□□ 1
ATF1P18846 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.27■□□□□ 0.99
ATF1P18846 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
ATF1P18846 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATF1P18846 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATF1P18846 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.26■□□□□ 0.99
ATF1P18846 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF1P18846 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATF1P18846 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF1P18846 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.25■□□□□ 0.99
ATF1P18846 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ATF1P18846 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATF1P18846 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF1P18846 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF1P18846 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF1P18846 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF1P18846 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.24■□□□□ 0.99
ATF1P18846 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.24■□□□□ 0.99
ATF1P18846 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF1P18846 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF1P18846 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF1P18846 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATF1P18846 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATF1P18846 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.23■□□□□ 0.99
ATF1P18846 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATF1P18846 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATF1P18846 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATF1P18846 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ATF1P18846 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATF1P18846 RPS2P35-201ENST00000443417 897 ntBASIC21.22■□□□□ 0.99
ATF1P18846 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.22■□□□□ 0.99
ATF1P18846 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATF1P18846 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.22■□□□□ 0.99
ATF1P18846 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.22■□□□□ 0.99
ATF1P18846 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.22■□□□□ 0.99
ATF1P18846 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATF1P18846 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATF1P18846 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
ATF1P18846 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATF1P18846 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ATF1P18846 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATF1P18846 LINC01971-201ENST00000617888 1048 ntBASIC21.21■□□□□ 0.99
ATF1P18846 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATF1P18846 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATF1P18846 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF1P18846 AL139125.2-201ENST00000623134 1869 ntBASIC21.2■□□□□ 0.98
ATF1P18846 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
ATF1P18846 AC138932.3-201ENST00000567634 1902 ntBASIC21.2■□□□□ 0.98
ATF1P18846 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF1P18846 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.2■□□□□ 0.98
ATF1P18846 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.2■□□□□ 0.98
ATF1P18846 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF1P18846 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF1P18846 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.2■□□□□ 0.98
ATF1P18846 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATF1P18846 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF1P18846 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATF1P18846 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF1P18846 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF1P18846 AC022211.4-201ENST00000625094 2161 ntBASIC21.19■□□□□ 0.98
ATF1P18846 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.19■□□□□ 0.98
ATF1P18846 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATF1P18846 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATF1P18846 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF1P18846 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF1P18846 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.18■□□□□ 0.98
ATF1P18846 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATF1P18846 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF1P18846 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.18■□□□□ 0.98
ATF1P18846 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF1P18846 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATF1P18846 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF1P18846 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF1P18846 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF1P18846 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF1P18846 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATF1P18846 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.17■□□□□ 0.98
ATF1P18846 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF1P18846 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF1P18846 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF1P18846 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF1P18846 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATF1P18846 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATF1P18846 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATF1P18846 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.16■□□□□ 0.98
ATF1P18846 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATF1P18846 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF1P18846 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.16■□□□□ 0.98
ATF1P18846 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF1P18846 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ATF1P18846 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L13-201ENST00000554103 1267 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L15-201ENST00000611059 1267 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L23-201ENST00000615195 1269 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L24-201ENST00000617576 1269 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L22-201ENST00000618238 1269 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms