Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
TRIM49CP0CI26 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM49CP0CI26 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM49CP0CI26 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.52■■□□□ 1.84
TRIM49CP0CI26 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM49CP0CI26 AC092803.2-201ENST00000564287 1899 ntBASIC26.52■■□□□ 1.84
TRIM49CP0CI26 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.52■■□□□ 1.84
TRIM49CP0CI26 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
TRIM49CP0CI26 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.51■■□□□ 1.83
TRIM49CP0CI26 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
TRIM49CP0CI26 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49CP0CI26 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49CP0CI26 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.5■■□□□ 1.83
TRIM49CP0CI26 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM49CP0CI26 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM49CP0CI26 GPX1-201ENST00000419349 1106 ntBASIC26.5■■□□□ 1.83
TRIM49CP0CI26 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.5■■□□□ 1.83
TRIM49CP0CI26 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.49■■□□□ 1.83
TRIM49CP0CI26 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM49CP0CI26 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
TRIM49CP0CI26 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM49CP0CI26 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.47■■□□□ 1.83
TRIM49CP0CI26 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM49CP0CI26 AC025884.2-201ENST00000553429 711 ntBASIC26.46■■□□□ 1.83
TRIM49CP0CI26 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM49CP0CI26 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM49CP0CI26 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TRIM49CP0CI26 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
TRIM49CP0CI26 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM49CP0CI26 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM49CP0CI26 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.45■■□□□ 1.82
TRIM49CP0CI26 ERN1-208ENST00000606895 2068 ntBASIC26.45■■□□□ 1.82
TRIM49CP0CI26 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49CP0CI26 AC145676.1-201ENST00000514988 2004 ntBASIC26.44■■□□□ 1.82
TRIM49CP0CI26 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49CP0CI26 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49CP0CI26 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49CP0CI26 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49CP0CI26 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49CP0CI26 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM49CP0CI26 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM49CP0CI26 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49CP0CI26 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49CP0CI26 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
TRIM49CP0CI26 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49CP0CI26 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.42■■□□□ 1.82
TRIM49CP0CI26 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM49CP0CI26 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM49CP0CI26 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM49CP0CI26 ECEL1P2-201ENST00000461596 1295 ntBASIC26.41■■□□□ 1.82
TRIM49CP0CI26 SMPD5-203ENST00000639008 1464 ntBASIC26.41■■□□□ 1.82
TRIM49CP0CI26 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM49CP0CI26 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM49CP0CI26 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.4■■□□□ 1.82
TRIM49CP0CI26 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.4■■□□□ 1.82
TRIM49CP0CI26 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.4■■□□□ 1.82
TRIM49CP0CI26 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
TRIM49CP0CI26 DUSP8P4-201ENST00000399538 1761 ntBASIC26.4■■□□□ 1.82
TRIM49CP0CI26 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TRIM49CP0CI26 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM49CP0CI26 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.39■■□□□ 1.82
TRIM49CP0CI26 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM49CP0CI26 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM49CP0CI26 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM49CP0CI26 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM49CP0CI26 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
TRIM49CP0CI26 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49CP0CI26 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.37■■□□□ 1.81
TRIM49CP0CI26 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49CP0CI26 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49CP0CI26 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
TRIM49CP0CI26 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM49CP0CI26 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM49CP0CI26 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TRIM49CP0CI26 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49CP0CI26 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49CP0CI26 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.35■■□□□ 1.81
TRIM49CP0CI26 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49CP0CI26 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49CP0CI26 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM49CP0CI26 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM49CP0CI26 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM49CP0CI26 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms