Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.4■□□□□ 0.7
SFTA3P0C7M3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SFTA3P0C7M3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SFTA3P0C7M3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFTA3P0C7M3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 AC022211.4-201ENST00000625094 2161 ntBASIC19.38■□□□□ 0.69
SFTA3P0C7M3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SFTA3P0C7M3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.37■□□□□ 0.69
SFTA3P0C7M3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SFTA3P0C7M3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SFTA3P0C7M3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.36■□□□□ 0.69
SFTA3P0C7M3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SFTA3P0C7M3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SFTA3P0C7M3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SFTA3P0C7M3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SFTA3P0C7M3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.35■□□□□ 0.69
SFTA3P0C7M3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFTA3P0C7M3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFTA3P0C7M3 AC018358.1-201ENST00000631079 1402 ntBASIC19.34■□□□□ 0.69
SFTA3P0C7M3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
SFTA3P0C7M3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFTA3P0C7M3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFTA3P0C7M3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFTA3P0C7M3 AP004609.3-201ENST00000610705 1884 ntBASIC19.34■□□□□ 0.69
SFTA3P0C7M3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFTA3P0C7M3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SFTA3P0C7M3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.33■□□□□ 0.69
SFTA3P0C7M3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SFTA3P0C7M3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SFTA3P0C7M3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.33■□□□□ 0.69
SFTA3P0C7M3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SFTA3P0C7M3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SFTA3P0C7M3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SFTA3P0C7M3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTA3P0C7M3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTA3P0C7M3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SFTA3P0C7M3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SFTA3P0C7M3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SFTA3P0C7M3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.29■□□□□ 0.68
SFTA3P0C7M3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SFTA3P0C7M3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SFTA3P0C7M3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SFTA3P0C7M3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTA3P0C7M3 AC127502.1-201ENST00000399971 1502 ntBASIC19.28■□□□□ 0.68
SFTA3P0C7M3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTA3P0C7M3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTA3P0C7M3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTA3P0C7M3 AC097639.1-201ENST00000565519 1891 ntBASIC19.28■□□□□ 0.68
SFTA3P0C7M3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTA3P0C7M3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTA3P0C7M3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTA3P0C7M3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.27■□□□□ 0.68
SFTA3P0C7M3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SFTA3P0C7M3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms