Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.88■□□□□ 0.93
CSF1P09603 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 WHAMMP2-203ENST00000563942 1603 ntBASIC20.88■□□□□ 0.93
CSF1P09603 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.86■□□□□ 0.93
CSF1P09603 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSF1P09603 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.86■□□□□ 0.93
CSF1P09603 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CSF1P09603 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSF1P09603 AC021231.2-201ENST00000594613 730 ntBASIC20.85■□□□□ 0.93
CSF1P09603 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CSF1P09603 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.84■□□□□ 0.93
CSF1P09603 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSF1P09603 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSF1P09603 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSF1P09603 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.83■□□□□ 0.93
CSF1P09603 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.83■□□□□ 0.92
CSF1P09603 AC010501.1-201ENST00000606270 1962 ntBASIC20.83■□□□□ 0.92
CSF1P09603 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.82■□□□□ 0.92
CSF1P09603 AC108673.1-201ENST00000510422 1159 ntBASIC20.82■□□□□ 0.92
CSF1P09603 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.82■□□□□ 0.92
CSF1P09603 MIR4449-201ENST00000578365 66 ntBASIC20.82■□□□□ 0.92
CSF1P09603 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
CSF1P09603 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.81■□□□□ 0.92
CSF1P09603 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.81■□□□□ 0.92
CSF1P09603 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1P09603 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1P09603 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1P09603 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1P09603 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CSF1P09603 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 MIR639-201ENST00000384974 98 ntBASIC20.8■□□□□ 0.92
CSF1P09603 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1P09603 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
CSF1P09603 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CSF1P09603 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1P09603 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1P09603 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.77■□□□□ 0.92
CSF1P09603 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1P09603 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CSF1P09603 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CSF1P09603 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSF1P09603 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSF1P09603 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.76■□□□□ 0.91
CSF1P09603 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.76■□□□□ 0.91
CSF1P09603 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.76■□□□□ 0.91
CSF1P09603 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.76■□□□□ 0.91
CSF1P09603 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CSF1P09603 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.75■□□□□ 0.91
CSF1P09603 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CSF1P09603 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.75■□□□□ 0.91
CSF1P09603 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms