Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.88■□□□□ 0.93
CSF1P09603 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 WHAMMP2-203ENST00000563942 1603 ntBASIC20.88■□□□□ 0.93
CSF1P09603 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1P09603 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSF1P09603 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.86■□□□□ 0.93
CSF1P09603 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSF1P09603 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.86■□□□□ 0.93
CSF1P09603 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSF1P09603 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CSF1P09603 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSF1P09603 AC021231.2-201ENST00000594613 730 ntBASIC20.85■□□□□ 0.93
CSF1P09603 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CSF1P09603 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.84■□□□□ 0.93
CSF1P09603 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSF1P09603 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSF1P09603 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSF1P09603 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.83■□□□□ 0.93
CSF1P09603 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.83■□□□□ 0.92
CSF1P09603 AC010501.1-201ENST00000606270 1962 ntBASIC20.83■□□□□ 0.92
CSF1P09603 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.82■□□□□ 0.92
CSF1P09603 AC108673.1-201ENST00000510422 1159 ntBASIC20.82■□□□□ 0.92
CSF1P09603 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.82■□□□□ 0.92
CSF1P09603 MIR4449-201ENST00000578365 66 ntBASIC20.82■□□□□ 0.92
CSF1P09603 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSF1P09603 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
CSF1P09603 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.81■□□□□ 0.92
CSF1P09603 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.81■□□□□ 0.92
CSF1P09603 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1P09603 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1P09603 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1P09603 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1P09603 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CSF1P09603 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 MIR639-201ENST00000384974 98 ntBASIC20.8■□□□□ 0.92
CSF1P09603 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1P09603 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1P09603 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CSF1P09603 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
CSF1P09603 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1P09603 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CSF1P09603 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1P09603 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1P09603 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1P09603 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.77■□□□□ 0.92
CSF1P09603 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1P09603 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CSF1P09603 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CSF1P09603 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSF1P09603 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSF1P09603 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.76■□□□□ 0.91
CSF1P09603 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.76■□□□□ 0.91
CSF1P09603 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.76■□□□□ 0.91
CSF1P09603 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.76■□□□□ 0.91
CSF1P09603 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSF1P09603 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CSF1P09603 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.75■□□□□ 0.91
CSF1P09603 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CSF1P09603 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.75■□□□□ 0.91
CSF1P09603 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSF1P09603 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms