Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
MMP2P08253 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
MMP2P08253 SMPD5-203ENST00000639008 1464 ntBASIC24.71■■□□□ 1.55
MMP2P08253 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
MMP2P08253 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.71■■□□□ 1.55
MMP2P08253 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
MMP2P08253 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
MMP2P08253 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
MMP2P08253 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
MMP2P08253 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
MMP2P08253 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
MMP2P08253 HSD17B1P1-201ENST00000590052 955 ntBASIC24.7■■□□□ 1.54
MMP2P08253 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.7■■□□□ 1.54
MMP2P08253 AC091060.1-201ENST00000623524 1766 ntBASIC24.7■■□□□ 1.54
MMP2P08253 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.69■■□□□ 1.54
MMP2P08253 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.69■■□□□ 1.54
MMP2P08253 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
MMP2P08253 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
MMP2P08253 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
MMP2P08253 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.68■■□□□ 1.54
MMP2P08253 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
MMP2P08253 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
MMP2P08253 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
MMP2P08253 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
MMP2P08253 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
MMP2P08253 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
MMP2P08253 RNF126P1-201ENST00000567452 1320 ntBASIC24.67■■□□□ 1.54
MMP2P08253 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.67■■□□□ 1.54
MMP2P08253 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.67■■□□□ 1.54
MMP2P08253 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.67■■□□□ 1.54
MMP2P08253 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.67■■□□□ 1.54
MMP2P08253 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MMP2P08253 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
MMP2P08253 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.66■■□□□ 1.54
MMP2P08253 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
MMP2P08253 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
MMP2P08253 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
MMP2P08253 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.65■■□□□ 1.54
MMP2P08253 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
MMP2P08253 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MMP2P08253 AC092803.2-201ENST00000564287 1899 ntBASIC24.64■■□□□ 1.54
MMP2P08253 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.64■■□□□ 1.54
MMP2P08253 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
MMP2P08253 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.64■■□□□ 1.53
MMP2P08253 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MMP2P08253 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.63■■□□□ 1.53
MMP2P08253 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.63■■□□□ 1.53
MMP2P08253 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
MMP2P08253 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MMP2P08253 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MMP2P08253 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.62■■□□□ 1.53
MMP2P08253 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.62■■□□□ 1.53
MMP2P08253 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MMP2P08253 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MMP2P08253 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.62■■□□□ 1.53
MMP2P08253 MIR3960-201ENST00000583311 91 ntBASIC24.62■■□□□ 1.53
MMP2P08253 AC007029.1-201ENST00000604183 313 ntBASIC24.62■■□□□ 1.53
MMP2P08253 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.62■■□□□ 1.53
MMP2P08253 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
MMP2P08253 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MMP2P08253 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MMP2P08253 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.61■■□□□ 1.53
MMP2P08253 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.61■■□□□ 1.53
MMP2P08253 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MMP2P08253 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MMP2P08253 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.6■■□□□ 1.53
MMP2P08253 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
MMP2P08253 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MMP2P08253 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MMP2P08253 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MMP2P08253 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
MMP2P08253 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MMP2P08253 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.59■■□□□ 1.53
MMP2P08253 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
MMP2P08253 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
MMP2P08253 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
MMP2P08253 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
MMP2P08253 RP9P-202ENST00000450133 1212 ntBASIC24.58■■□□□ 1.53
MMP2P08253 ERN1-208ENST00000606895 2068 ntBASIC24.57■■□□□ 1.52
MMP2P08253 RARRES2P2-201ENST00000394842 485 ntBASIC24.57■■□□□ 1.52
MMP2P08253 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.57■■□□□ 1.52
MMP2P08253 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MMP2P08253 AC093536.1-201ENST00000569153 554 ntBASIC24.56■■□□□ 1.52
MMP2P08253 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
MMP2P08253 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP2P08253 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.56■■□□□ 1.52
MMP2P08253 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.56■■□□□ 1.52
MMP2P08253 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP2P08253 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP2P08253 AC145676.1-201ENST00000514988 2004 ntBASIC24.56■■□□□ 1.52
MMP2P08253 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MMP2P08253 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.55■■□□□ 1.52
MMP2P08253 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MMP2P08253 DUSP8P4-201ENST00000399538 1761 ntBASIC24.55■■□□□ 1.52
MMP2P08253 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
MMP2P08253 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.55■■□□□ 1.52
MMP2P08253 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MMP2P08253 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MMP2P08253 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MMP2P08253 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms