Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTSDP07339 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTSDP07339 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.14■□□□□ 0.81
CTSDP07339 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTSDP07339 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTSDP07339 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTSDP07339 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTSDP07339 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.13■□□□□ 0.81
CTSDP07339 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSDP07339 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.13■□□□□ 0.81
CTSDP07339 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSDP07339 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSDP07339 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSDP07339 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSDP07339 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSDP07339 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSDP07339 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.12■□□□□ 0.81
CTSDP07339 DUX4L28-201ENST00000623687 678 ntBASIC20.12■□□□□ 0.81
CTSDP07339 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSDP07339 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSDP07339 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTSDP07339 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTSDP07339 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.12■□□□□ 0.81
CTSDP07339 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CTSDP07339 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSDP07339 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSDP07339 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CTSDP07339 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.1■□□□□ 0.81
CTSDP07339 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.1■□□□□ 0.81
CTSDP07339 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSDP07339 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSDP07339 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSDP07339 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.1■□□□□ 0.81
CTSDP07339 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CTSDP07339 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSDP07339 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.1■□□□□ 0.81
CTSDP07339 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSDP07339 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSDP07339 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CTSDP07339 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.09■□□□□ 0.81
CTSDP07339 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.09■□□□□ 0.81
CTSDP07339 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CTSDP07339 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CTSDP07339 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.09■□□□□ 0.81
CTSDP07339 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSDP07339 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTSDP07339 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.09■□□□□ 0.81
CTSDP07339 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSDP07339 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSDP07339 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSDP07339 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSDP07339 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSDP07339 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSDP07339 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSDP07339 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CTSDP07339 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSDP07339 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSDP07339 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSDP07339 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSDP07339 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSDP07339 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSDP07339 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CTSDP07339 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSDP07339 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSDP07339 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSDP07339 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSDP07339 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSDP07339 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSDP07339 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSDP07339 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSDP07339 AC096887.2-201ENST00000623443 1957 ntBASIC20.04■□□□□ 0.8
CTSDP07339 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSDP07339 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSDP07339 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSDP07339 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSDP07339 MIR3665-201ENST00000578708 105 ntBASIC20.04■□□□□ 0.8
CTSDP07339 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSDP07339 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSDP07339 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSDP07339 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSDP07339 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSDP07339 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSDP07339 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSDP07339 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSDP07339 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTSDP07339 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSDP07339 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CTSDP07339 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTSDP07339 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTSDP07339 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTSDP07339 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CTSDP07339 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTSDP07339 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTSDP07339 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms