Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.46■■□□□ 1.03
ZNF254O75437 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.46■■□□□ 1.03
ZNF254O75437 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
ZNF254O75437 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF254O75437 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZNF254O75437 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF254O75437 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF254O75437 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF254O75437 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF254O75437 DUX4L11-201ENST00000611504 1267 ntBASIC21.45■■□□□ 1.02
ZNF254O75437 DUX4L12-201ENST00000614593 1267 ntBASIC21.45■■□□□ 1.02
ZNF254O75437 DUX4L14-201ENST00000621227 1267 ntBASIC21.45■■□□□ 1.02
ZNF254O75437 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF254O75437 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF254O75437 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF254O75437 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ZNF254O75437 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF254O75437 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF254O75437 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF254O75437 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF254O75437 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF254O75437 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF254O75437 MIR219A2-201ENST00000608502 1504 ntBASIC21.44■■□□□ 1.02
ZNF254O75437 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF254O75437 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF254O75437 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF254O75437 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.42■■□□□ 1.02
ZNF254O75437 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.42■■□□□ 1.02
ZNF254O75437 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.42■■□□□ 1.02
ZNF254O75437 AC010501.1-201ENST00000606270 1962 ntBASIC21.42■■□□□ 1.02
ZNF254O75437 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF254O75437 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
ZNF254O75437 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF254O75437 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF254O75437 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ZNF254O75437 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF254O75437 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF254O75437 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF254O75437 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
ZNF254O75437 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
ZNF254O75437 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF254O75437 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF254O75437 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ZNF254O75437 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF254O75437 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.4■■□□□ 1.02
ZNF254O75437 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF254O75437 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF254O75437 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF254O75437 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.39■■□□□ 1.01
ZNF254O75437 AC093323.1-202ENST00000635031 2045 ntBASIC21.39■■□□□ 1.01
ZNF254O75437 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF254O75437 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF254O75437 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.38■■□□□ 1.01
ZNF254O75437 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF254O75437 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF254O75437 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF254O75437 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF254O75437 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ZNF254O75437 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.37■■□□□ 1.01
ZNF254O75437 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF254O75437 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF254O75437 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF254O75437 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF254O75437 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF254O75437 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF254O75437 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF254O75437 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF254O75437 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF254O75437 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF254O75437 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF254O75437 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
ZNF254O75437 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF254O75437 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
ZNF254O75437 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.35■■□□□ 1.01
ZNF254O75437 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF254O75437 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF254O75437 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF254O75437 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF254O75437 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ZNF254O75437 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF254O75437 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF254O75437 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF254O75437 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF254O75437 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF254O75437 ZNRF2P2-203ENST00000454624 420 ntBASIC21.34■■□□□ 1.01
ZNF254O75437 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF254O75437 ERN1-208ENST00000606895 2068 ntBASIC21.33■■□□□ 1.01
ZNF254O75437 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF254O75437 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF254O75437 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF254O75437 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF254O75437 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF254O75437 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.33■■□□□ 1.01
ZNF254O75437 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms