Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTP4A3O75365 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTP4A3O75365 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTP4A3O75365 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTP4A3O75365 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.97■■□□□ 1.11
PTP4A3O75365 AL359258.2-201ENST00000564063 1566 ntBASIC21.97■■□□□ 1.11
PTP4A3O75365 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTP4A3O75365 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTP4A3O75365 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTP4A3O75365 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTP4A3O75365 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PTP4A3O75365 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTP4A3O75365 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PTP4A3O75365 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PTP4A3O75365 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.96■■□□□ 1.11
PTP4A3O75365 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.96■■□□□ 1.11
PTP4A3O75365 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.96■■□□□ 1.11
PTP4A3O75365 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PTP4A3O75365 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTP4A3O75365 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
PTP4A3O75365 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.95■■□□□ 1.1
PTP4A3O75365 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTP4A3O75365 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTP4A3O75365 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.94■■□□□ 1.1
PTP4A3O75365 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTP4A3O75365 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
PTP4A3O75365 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTP4A3O75365 AL359504.2-201ENST00000605506 1601 ntBASIC21.94■■□□□ 1.1
PTP4A3O75365 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PTP4A3O75365 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.94■■□□□ 1.1
PTP4A3O75365 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.93■■□□□ 1.1
PTP4A3O75365 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTP4A3O75365 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTP4A3O75365 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.93■■□□□ 1.1
PTP4A3O75365 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.93■■□□□ 1.1
PTP4A3O75365 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PTP4A3O75365 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.92■■□□□ 1.1
PTP4A3O75365 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTP4A3O75365 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTP4A3O75365 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTP4A3O75365 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.91■■□□□ 1.1
PTP4A3O75365 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PTP4A3O75365 CR559946.2-201ENST00000623684 991 ntBASIC21.91■■□□□ 1.1
PTP4A3O75365 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PTP4A3O75365 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PTP4A3O75365 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTP4A3O75365 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTP4A3O75365 ABHD17AP4-201ENST00000411545 909 ntBASIC21.9■■□□□ 1.1
PTP4A3O75365 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
PTP4A3O75365 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTP4A3O75365 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTP4A3O75365 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PTP4A3O75365 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.89■■□□□ 1.09
PTP4A3O75365 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.89■■□□□ 1.09
PTP4A3O75365 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTP4A3O75365 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTP4A3O75365 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTP4A3O75365 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.88■■□□□ 1.09
PTP4A3O75365 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.88■■□□□ 1.09
PTP4A3O75365 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTP4A3O75365 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTP4A3O75365 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PTP4A3O75365 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTP4A3O75365 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTP4A3O75365 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTP4A3O75365 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTP4A3O75365 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTP4A3O75365 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PTP4A3O75365 AC096887.2-201ENST00000623443 1957 ntBASIC21.87■■□□□ 1.09
PTP4A3O75365 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTP4A3O75365 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTP4A3O75365 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PTP4A3O75365 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PTP4A3O75365 MIR3648-2-201ENST00000581792 180 ntBASIC21.86■■□□□ 1.09
PTP4A3O75365 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.86■■□□□ 1.09
PTP4A3O75365 MIR3648-1-201ENST00000615959 180 ntBASIC21.86■■□□□ 1.09
PTP4A3O75365 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTP4A3O75365 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTP4A3O75365 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTP4A3O75365 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
PTP4A3O75365 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PTP4A3O75365 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PTP4A3O75365 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PTP4A3O75365 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.85■■□□□ 1.09
PTP4A3O75365 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PTP4A3O75365 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTP4A3O75365 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A3O75365 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.84■■□□□ 1.09
PTP4A3O75365 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PTP4A3O75365 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.84■■□□□ 1.09
PTP4A3O75365 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.84■■□□□ 1.09
PTP4A3O75365 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTP4A3O75365 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTP4A3O75365 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms