Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PTCD1O75127 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.67
PTCD1O75127 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.7■■■□□ 2.67
PTCD1O75127 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
PTCD1O75127 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.7■■■□□ 2.66
PTCD1O75127 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
PTCD1O75127 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.68■■■□□ 2.66
PTCD1O75127 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PTCD1O75127 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.68■■■□□ 2.66
PTCD1O75127 GUSBP5-201ENST00000418136 578 ntBASIC31.68■■■□□ 2.66
PTCD1O75127 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.68■■■□□ 2.66
PTCD1O75127 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PTCD1O75127 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.68■■■□□ 2.66
PTCD1O75127 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTCD1O75127 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PTCD1O75127 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.67■■■□□ 2.66
PTCD1O75127 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.67■■■□□ 2.66
PTCD1O75127 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PTCD1O75127 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
PTCD1O75127 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
PTCD1O75127 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.66■■■□□ 2.66
PTCD1O75127 AL031848.2-201ENST00000607670 837 ntBASIC31.66■■■□□ 2.66
PTCD1O75127 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
PTCD1O75127 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PTCD1O75127 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
PTCD1O75127 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
PTCD1O75127 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.65■■■□□ 2.66
PTCD1O75127 AC131212.1-201ENST00000613771 668 ntBASIC31.65■■■□□ 2.66
PTCD1O75127 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
PTCD1O75127 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTCD1O75127 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.64■■■□□ 2.66
PTCD1O75127 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PTCD1O75127 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
PTCD1O75127 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTCD1O75127 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTCD1O75127 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.63■■■□□ 2.65
PTCD1O75127 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PTCD1O75127 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTCD1O75127 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTCD1O75127 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTCD1O75127 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
PTCD1O75127 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.62■■■□□ 2.65
PTCD1O75127 THA1P-201ENST00000590384 1145 ntBASIC31.62■■■□□ 2.65
PTCD1O75127 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
PTCD1O75127 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.61■■■□□ 2.65
PTCD1O75127 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PTCD1O75127 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PTCD1O75127 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
PTCD1O75127 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.6■■■□□ 2.65
PTCD1O75127 AC087393.1-201ENST00000582896 145 ntBASIC31.6■■■□□ 2.65
PTCD1O75127 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PTCD1O75127 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
PTCD1O75127 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTCD1O75127 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
PTCD1O75127 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
PTCD1O75127 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.59■■■□□ 2.65
PTCD1O75127 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
PTCD1O75127 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTCD1O75127 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTCD1O75127 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
PTCD1O75127 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTCD1O75127 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.57■■■□□ 2.64
PTCD1O75127 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.57■■■□□ 2.64
PTCD1O75127 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PTCD1O75127 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTCD1O75127 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTCD1O75127 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
PTCD1O75127 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTCD1O75127 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PTCD1O75127 AC019171.1-201ENST00000601251 1056 ntBASIC31.56■■■□□ 2.64
PTCD1O75127 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PTCD1O75127 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PTCD1O75127 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
PTCD1O75127 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PTCD1O75127 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PTCD1O75127 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.55■■■□□ 2.64
PTCD1O75127 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PTCD1O75127 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTCD1O75127 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PTCD1O75127 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.54■■■□□ 2.64
PTCD1O75127 RPS2P7-201ENST00000447334 885 ntBASIC31.54■■■□□ 2.64
PTCD1O75127 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTCD1O75127 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTCD1O75127 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.54■■■□□ 2.64
PTCD1O75127 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
PTCD1O75127 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.53■■■□□ 2.64
PTCD1O75127 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTCD1O75127 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTCD1O75127 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTCD1O75127 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTCD1O75127 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
PTCD1O75127 AL449106.1-201ENST00000608517 1980 ntBASIC31.51■■■□□ 2.63
PTCD1O75127 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
PTCD1O75127 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.51■■■□□ 2.63
PTCD1O75127 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.51■■■□□ 2.63
PTCD1O75127 DRD5P2-201ENST00000421395 2012 ntBASIC31.5■■■□□ 2.63
PTCD1O75127 LONRF2P2-201ENST00000439212 571 ntBASIC31.5■■■□□ 2.63
PTCD1O75127 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PTCD1O75127 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
PTCD1O75127 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms