Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MIR3621-201ENST00000580529 85 ntBASIC27.53■■■□□ 2
TNRC18O15417 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.53■■■□□ 2
TNRC18O15417 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TNRC18O15417 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
TNRC18O15417 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TNRC18O15417 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TNRC18O15417 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TNRC18O15417 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.52■■■□□ 2
TNRC18O15417 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TNRC18O15417 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.52■■■□□ 2
TNRC18O15417 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TNRC18O15417 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.51■■■□□ 2
TNRC18O15417 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.51■■■□□ 2
TNRC18O15417 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.51■■□□□ 1.99
TNRC18O15417 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TNRC18O15417 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.51■■□□□ 1.99
TNRC18O15417 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.51■■□□□ 1.99
TNRC18O15417 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.5■■□□□ 1.99
TNRC18O15417 AC021242.3-201ENST00000607598 1377 ntBASIC27.5■■□□□ 1.99
TNRC18O15417 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TNRC18O15417 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TNRC18O15417 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.49■■□□□ 1.99
TNRC18O15417 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.49■■□□□ 1.99
TNRC18O15417 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.49■■□□□ 1.99
TNRC18O15417 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TNRC18O15417 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.48■■□□□ 1.99
TNRC18O15417 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.48■■□□□ 1.99
TNRC18O15417 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.48■■□□□ 1.99
TNRC18O15417 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
TNRC18O15417 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TNRC18O15417 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.47■■□□□ 1.99
TNRC18O15417 AC087393.1-201ENST00000582896 145 ntBASIC27.47■■□□□ 1.99
TNRC18O15417 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TNRC18O15417 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.46■■□□□ 1.99
TNRC18O15417 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TNRC18O15417 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TNRC18O15417 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.99
TNRC18O15417 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TNRC18O15417 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TNRC18O15417 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TNRC18O15417 AC092028.1-203ENST00000608262 953 ntBASIC27.45■■□□□ 1.98
TNRC18O15417 AC022616.5-201ENST00000518796 181 ntBASIC27.44■■□□□ 1.98
TNRC18O15417 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TNRC18O15417 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.44■■□□□ 1.98
TNRC18O15417 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TNRC18O15417 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.44■■□□□ 1.98
TNRC18O15417 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TNRC18O15417 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TNRC18O15417 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TNRC18O15417 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TNRC18O15417 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.42■■□□□ 1.98
TNRC18O15417 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.42■■□□□ 1.98
TNRC18O15417 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TNRC18O15417 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TNRC18O15417 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TNRC18O15417 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
TNRC18O15417 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.41■■□□□ 1.98
TNRC18O15417 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.41■■□□□ 1.98
TNRC18O15417 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TNRC18O15417 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TNRC18O15417 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC27.41■■□□□ 1.98
TNRC18O15417 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TNRC18O15417 PBX2P1-201ENST00000493219 1291 ntBASIC27.4■■□□□ 1.98
TNRC18O15417 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.4■■□□□ 1.98
TNRC18O15417 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNRC18O15417 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.4■■□□□ 1.98
TNRC18O15417 AC137630.3-201ENST00000607245 391 ntBASIC27.4■■□□□ 1.98
TNRC18O15417 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TNRC18O15417 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TNRC18O15417 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.39■■□□□ 1.97
TNRC18O15417 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.39■■□□□ 1.97
TNRC18O15417 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.38■■□□□ 1.97
TNRC18O15417 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
TNRC18O15417 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNRC18O15417 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.38■■□□□ 1.97
TNRC18O15417 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TNRC18O15417 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNRC18O15417 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TNRC18O15417 AC105265.2-201ENST00000467189 838 ntBASIC27.36■■□□□ 1.97
TNRC18O15417 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TNRC18O15417 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.36■■□□□ 1.97
TNRC18O15417 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
TNRC18O15417 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.36■■□□□ 1.97
TNRC18O15417 MIR6724-1-201ENST00000616420 92 ntBASIC27.36■■□□□ 1.97
TNRC18O15417 MIR6724-2-201ENST00000616483 92 ntBASIC27.36■■□□□ 1.97
TNRC18O15417 MIR6724-4-201ENST00000617390 92 ntBASIC27.36■■□□□ 1.97
TNRC18O15417 MIR6724-3-201ENST00000622482 92 ntBASIC27.36■■□□□ 1.97
TNRC18O15417 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.35■■□□□ 1.97
TNRC18O15417 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
TNRC18O15417 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TNRC18O15417 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.34■■□□□ 1.97
TNRC18O15417 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
TNRC18O15417 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNRC18O15417 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TNRC18O15417 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNRC18O15417 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNRC18O15417 ID1-201ENST00000376105 1233 ntBASIC27.33■■□□□ 1.97
TNRC18O15417 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.33■■□□□ 1.97
TNRC18O15417 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.33■■□□□ 1.97
TNRC18O15417 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms