Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBFD1O14562 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
UBFD1O14562 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBFD1O14562 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBFD1O14562 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.68■■□□□ 1.38
UBFD1O14562 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
UBFD1O14562 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.68■■□□□ 1.38
UBFD1O14562 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBFD1O14562 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBFD1O14562 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
UBFD1O14562 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBFD1O14562 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBFD1O14562 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.67■■□□□ 1.38
UBFD1O14562 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
UBFD1O14562 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBFD1O14562 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBFD1O14562 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBFD1O14562 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBFD1O14562 ZNRF2P2-203ENST00000454624 420 ntBASIC23.66■■□□□ 1.38
UBFD1O14562 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBFD1O14562 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UBFD1O14562 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBFD1O14562 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
UBFD1O14562 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
UBFD1O14562 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.64■■□□□ 1.37
UBFD1O14562 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
UBFD1O14562 AL359258.2-201ENST00000564063 1566 ntBASIC23.64■■□□□ 1.37
UBFD1O14562 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.64■■□□□ 1.37
UBFD1O14562 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
UBFD1O14562 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
UBFD1O14562 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
UBFD1O14562 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
UBFD1O14562 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.63■■□□□ 1.37
UBFD1O14562 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
UBFD1O14562 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UBFD1O14562 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UBFD1O14562 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UBFD1O14562 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
UBFD1O14562 AC096887.2-201ENST00000623443 1957 ntBASIC23.63■■□□□ 1.37
UBFD1O14562 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.63■■□□□ 1.37
UBFD1O14562 AL359504.2-201ENST00000605506 1601 ntBASIC23.62■■□□□ 1.37
UBFD1O14562 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
UBFD1O14562 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.62■■□□□ 1.37
UBFD1O14562 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBFD1O14562 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBFD1O14562 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.62■■□□□ 1.37
UBFD1O14562 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
UBFD1O14562 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
UBFD1O14562 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBFD1O14562 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
UBFD1O14562 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.61■■□□□ 1.37
UBFD1O14562 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
UBFD1O14562 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.61■■□□□ 1.37
UBFD1O14562 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
UBFD1O14562 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.61■■□□□ 1.37
UBFD1O14562 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.61■■□□□ 1.37
UBFD1O14562 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
UBFD1O14562 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
UBFD1O14562 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
UBFD1O14562 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
UBFD1O14562 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
UBFD1O14562 AC093323.1-202ENST00000635031 2045 ntBASIC23.59■■□□□ 1.37
UBFD1O14562 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.59■■□□□ 1.37
UBFD1O14562 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.59■■□□□ 1.37
UBFD1O14562 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
UBFD1O14562 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
UBFD1O14562 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.58■■□□□ 1.37
UBFD1O14562 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UBFD1O14562 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
UBFD1O14562 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.58■■□□□ 1.37
UBFD1O14562 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
UBFD1O14562 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBFD1O14562 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBFD1O14562 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBFD1O14562 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBFD1O14562 CR559946.2-201ENST00000623684 991 ntBASIC23.57■■□□□ 1.36
UBFD1O14562 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBFD1O14562 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
UBFD1O14562 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBFD1O14562 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.56■■□□□ 1.36
UBFD1O14562 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBFD1O14562 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
UBFD1O14562 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBFD1O14562 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.56■■□□□ 1.36
UBFD1O14562 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UBFD1O14562 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UBFD1O14562 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBFD1O14562 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
UBFD1O14562 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
UBFD1O14562 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.55■■□□□ 1.36
UBFD1O14562 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBFD1O14562 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
UBFD1O14562 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
UBFD1O14562 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
UBFD1O14562 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBFD1O14562 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.54■■□□□ 1.36
UBFD1O14562 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBFD1O14562 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBFD1O14562 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBFD1O14562 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms