Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPB1O00241 AL359504.2-201ENST00000605506 1601 ntBASIC20.5■□□□□ 0.87
SIRPB1O00241 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SIRPB1O00241 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.5■□□□□ 0.87
SIRPB1O00241 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SIRPB1O00241 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPB1O00241 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPB1O00241 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPB1O00241 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPB1O00241 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPB1O00241 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 DUSP8P4-201ENST00000399538 1761 ntBASIC20.49■□□□□ 0.87
SIRPB1O00241 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SIRPB1O00241 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.49■□□□□ 0.87
SIRPB1O00241 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPB1O00241 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPB1O00241 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPB1O00241 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPB1O00241 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPB1O00241 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPB1O00241 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPB1O00241 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SIRPB1O00241 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPB1O00241 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
SIRPB1O00241 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPB1O00241 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPB1O00241 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SIRPB1O00241 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPB1O00241 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPB1O00241 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.46■□□□□ 0.87
SIRPB1O00241 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPB1O00241 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.46■□□□□ 0.87
SIRPB1O00241 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPB1O00241 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.46■□□□□ 0.87
SIRPB1O00241 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPB1O00241 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPB1O00241 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPB1O00241 ERN1-208ENST00000606895 2068 ntBASIC20.44■□□□□ 0.86
SIRPB1O00241 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 MIR639-201ENST00000384974 98 ntBASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.44■□□□□ 0.86
SIRPB1O00241 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.44■□□□□ 0.86
SIRPB1O00241 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIRPB1O00241 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SIRPB1O00241 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPB1O00241 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.43■□□□□ 0.86
SIRPB1O00241 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SIRPB1O00241 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SIRPB1O00241 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIRPB1O00241 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SIRPB1O00241 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SIRPB1O00241 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.42■□□□□ 0.86
SIRPB1O00241 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIRPB1O00241 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPB1O00241 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.41■□□□□ 0.86
SIRPB1O00241 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.41■□□□□ 0.86
SIRPB1O00241 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.41■□□□□ 0.86
SIRPB1O00241 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPB1O00241 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPB1O00241 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPB1O00241 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIRPB1O00241 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPB1O00241 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPB1O00241 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIRPB1O00241 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SIRPB1O00241 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPB1O00241 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.39■□□□□ 0.85
SIRPB1O00241 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPB1O00241 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIRPB1O00241 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms