Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSGN1A6NI15 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MSGN1A6NI15 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.09■□□□□ 0.81
MSGN1A6NI15 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.09■□□□□ 0.81
MSGN1A6NI15 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.09■□□□□ 0.81
MSGN1A6NI15 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.09■□□□□ 0.81
MSGN1A6NI15 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSGN1A6NI15 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSGN1A6NI15 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MSGN1A6NI15 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSGN1A6NI15 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSGN1A6NI15 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MSGN1A6NI15 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.08■□□□□ 0.81
MSGN1A6NI15 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
MSGN1A6NI15 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.08■□□□□ 0.8
MSGN1A6NI15 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSGN1A6NI15 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MSGN1A6NI15 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.07■□□□□ 0.8
MSGN1A6NI15 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MSGN1A6NI15 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MSGN1A6NI15 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.07■□□□□ 0.8
MSGN1A6NI15 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.07■□□□□ 0.8
MSGN1A6NI15 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSGN1A6NI15 AC142381.3-201ENST00000568208 1670 ntBASIC20.07■□□□□ 0.8
MSGN1A6NI15 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSGN1A6NI15 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.06■□□□□ 0.8
MSGN1A6NI15 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSGN1A6NI15 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MSGN1A6NI15 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSGN1A6NI15 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MSGN1A6NI15 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MSGN1A6NI15 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MSGN1A6NI15 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MSGN1A6NI15 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MSGN1A6NI15 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSGN1A6NI15 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSGN1A6NI15 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSGN1A6NI15 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
MSGN1A6NI15 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MSGN1A6NI15 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSGN1A6NI15 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MSGN1A6NI15 AL139125.2-201ENST00000623134 1869 ntBASIC20.05■□□□□ 0.8
MSGN1A6NI15 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MSGN1A6NI15 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MSGN1A6NI15 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSGN1A6NI15 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSGN1A6NI15 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MSGN1A6NI15 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSGN1A6NI15 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSGN1A6NI15 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.03■□□□□ 0.8
MSGN1A6NI15 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MSGN1A6NI15 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.03■□□□□ 0.8
MSGN1A6NI15 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MSGN1A6NI15 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MSGN1A6NI15 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MSGN1A6NI15 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.03■□□□□ 0.8
MSGN1A6NI15 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSGN1A6NI15 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSGN1A6NI15 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MSGN1A6NI15 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSGN1A6NI15 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSGN1A6NI15 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MSGN1A6NI15 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MSGN1A6NI15 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.02■□□□□ 0.8
MSGN1A6NI15 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.02■□□□□ 0.8
MSGN1A6NI15 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
MSGN1A6NI15 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MSGN1A6NI15 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.02■□□□□ 0.79
MSGN1A6NI15 AC110285.7-201ENST00000624417 1536 ntBASIC20.02■□□□□ 0.79
MSGN1A6NI15 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSGN1A6NI15 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSGN1A6NI15 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.01■□□□□ 0.79
MSGN1A6NI15 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MSGN1A6NI15 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.01■□□□□ 0.79
MSGN1A6NI15 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
MSGN1A6NI15 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSGN1A6NI15 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSGN1A6NI15 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSGN1A6NI15 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSGN1A6NI15 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20■□□□□ 0.79
MSGN1A6NI15 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSGN1A6NI15 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
MSGN1A6NI15 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20■□□□□ 0.79
MSGN1A6NI15 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MSGN1A6NI15 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.99■□□□□ 0.79
MSGN1A6NI15 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSGN1A6NI15 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSGN1A6NI15 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSGN1A6NI15 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSGN1A6NI15 AC138932.3-201ENST00000567634 1902 ntBASIC19.99■□□□□ 0.79
MSGN1A6NI15 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MSGN1A6NI15 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSGN1A6NI15 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSGN1A6NI15 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms