Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRAV22A0A0B4J277 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV22A0A0B4J277 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV22A0A0B4J277 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV22A0A0B4J277 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV22A0A0B4J277 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV22A0A0B4J277 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV22A0A0B4J277 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV22A0A0B4J277 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV22A0A0B4J277 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV22A0A0B4J277 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV22A0A0B4J277 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV22A0A0B4J277 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV22A0A0B4J277 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV22A0A0B4J277 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV22A0A0B4J277 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV22A0A0B4J277 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV22A0A0B4J277 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV22A0A0B4J277 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV22A0A0B4J277 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 AC142381.3-201ENST00000568208 1670 ntBASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 AP002414.2-202ENST00000590929 1450 ntBASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV22A0A0B4J277 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 MED17-227ENST00000640521 2047 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV22A0A0B4J277 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV22A0A0B4J277 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 AL139125.2-201ENST00000623134 1869 ntBASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV22A0A0B4J277 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV22A0A0B4J277 AC100797.4-201ENST00000631653 1827 ntBASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV22A0A0B4J277 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV22A0A0B4J277 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms