Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV8-4A0A0B4J246 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV8-4A0A0B4J246 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-4A0A0B4J246 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAV8-4A0A0B4J246 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV8-4A0A0B4J246 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-4A0A0B4J246 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 AC008813.1-201ENST00000536597 885 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L13-201ENST00000554103 1267 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L15-201ENST00000611059 1267 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L23-201ENST00000615195 1269 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L24-201ENST00000617576 1269 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L22-201ENST00000618238 1269 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L20-201ENST00000619712 1269 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L21-201ENST00000622058 1269 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L10-201ENST00000622460 1267 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L25-201ENST00000624915 1269 ntBASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV8-4A0A0B4J246 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV8-4A0A0B4J246 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-4A0A0B4J246 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV8-4A0A0B4J246 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV8-4A0A0B4J246 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-4A0A0B4J246 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-4A0A0B4J246 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L11-201ENST00000611504 1267 ntBASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L12-201ENST00000614593 1267 ntBASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 DUX4L14-201ENST00000621227 1267 ntBASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-4A0A0B4J246 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-4A0A0B4J246 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-4A0A0B4J246 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV8-4A0A0B4J246 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-4A0A0B4J246 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV8-4A0A0B4J246 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-4A0A0B4J246 ZNRF2P2-203ENST00000454624 420 ntBASIC16.77■□□□□ 0.28
TRAV8-4A0A0B4J246 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV8-4A0A0B4J246 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
TRAV8-4A0A0B4J246 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.77■□□□□ 0.27
TRAV8-4A0A0B4J246 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV8-4A0A0B4J246 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-4A0A0B4J246 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV8-4A0A0B4J246 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV8-4A0A0B4J246 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV8-4A0A0B4J246 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-4A0A0B4J246 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-4A0A0B4J246 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 WHAMMP3-201ENST00000611636 1609 ntBASIC16.73■□□□□ 0.27
TRAV8-4A0A0B4J246 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms