Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBV6-7A0A0A0MS04 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-7A0A0A0MS04 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-7A0A0A0MS04 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-7A0A0A0MS04 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-7A0A0A0MS04 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.33■□□□□ 0.85
TRBV6-7A0A0A0MS04 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV6-7A0A0A0MS04 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.33■□□□□ 0.84
TRBV6-7A0A0A0MS04 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRBV6-7A0A0A0MS04 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRBV6-7A0A0A0MS04 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV6-7A0A0A0MS04 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-7A0A0A0MS04 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 LINC01971-201ENST00000617888 1048 ntBASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-7A0A0A0MS04 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-7A0A0A0MS04 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV6-7A0A0A0MS04 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-7A0A0A0MS04 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.28■□□□□ 0.84
TRBV6-7A0A0A0MS04 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-7A0A0A0MS04 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-7A0A0A0MS04 AC012676.1-201ENST00000574705 1949 ntBASIC20.27■□□□□ 0.84
TRBV6-7A0A0A0MS04 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-7A0A0A0MS04 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRBV6-7A0A0A0MS04 AC142381.3-201ENST00000568208 1670 ntBASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV6-7A0A0A0MS04 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 AC010501.1-201ENST00000606270 1962 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L13-201ENST00000554103 1267 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L15-201ENST00000611059 1267 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L23-201ENST00000615195 1269 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L24-201ENST00000617576 1269 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L22-201ENST00000618238 1269 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L20-201ENST00000619712 1269 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L21-201ENST00000622058 1269 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L10-201ENST00000622460 1267 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 DUX4L25-201ENST00000624915 1269 ntBASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-7A0A0A0MS04 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 AC008813.1-201ENST00000536597 885 ntBASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV6-7A0A0A0MS04 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 AC133561.1-201ENST00000568600 2415 ntBASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms