Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD1Q9UJJ7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 AL449106.1-201ENST00000608517 1980 ntBASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD1Q9UJJ7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RPUSD1Q9UJJ7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPUSD1Q9UJJ7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.4■□□□□ 0.86
RPUSD1Q9UJJ7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPUSD1Q9UJJ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.39■□□□□ 0.85
RPUSD1Q9UJJ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RPUSD1Q9UJJ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD1Q9UJJ7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPUSD1Q9UJJ7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.38■□□□□ 0.85
RPUSD1Q9UJJ7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.38■□□□□ 0.85
RPUSD1Q9UJJ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RPUSD1Q9UJJ7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPUSD1Q9UJJ7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPUSD1Q9UJJ7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.37■□□□□ 0.85
RPUSD1Q9UJJ7 SMPD5-203ENST00000639008 1464 ntBASIC20.37■□□□□ 0.85
RPUSD1Q9UJJ7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.37■□□□□ 0.85
RPUSD1Q9UJJ7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPUSD1Q9UJJ7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPUSD1Q9UJJ7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.37■□□□□ 0.85
RPUSD1Q9UJJ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPUSD1Q9UJJ7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 AL359504.2-201ENST00000605506 1601 ntBASIC20.35■□□□□ 0.85
RPUSD1Q9UJJ7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPUSD1Q9UJJ7 AC025884.2-201ENST00000553429 711 ntBASIC20.34■□□□□ 0.85
RPUSD1Q9UJJ7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPUSD1Q9UJJ7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPUSD1Q9UJJ7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPUSD1Q9UJJ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.33■□□□□ 0.85
RPUSD1Q9UJJ7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.33■□□□□ 0.85
RPUSD1Q9UJJ7 AC007029.1-201ENST00000604183 313 ntBASIC20.33■□□□□ 0.85
RPUSD1Q9UJJ7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.33■□□□□ 0.84
RPUSD1Q9UJJ7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPUSD1Q9UJJ7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
RPUSD1Q9UJJ7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPUSD1Q9UJJ7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPUSD1Q9UJJ7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPUSD1Q9UJJ7 AP004609.3-201ENST00000610705 1884 ntBASIC20.31■□□□□ 0.84
RPUSD1Q9UJJ7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.31■□□□□ 0.84
RPUSD1Q9UJJ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.31■□□□□ 0.84
RPUSD1Q9UJJ7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPUSD1Q9UJJ7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPUSD1Q9UJJ7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPUSD1Q9UJJ7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.3■□□□□ 0.84
RPUSD1Q9UJJ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.3■□□□□ 0.84
RPUSD1Q9UJJ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPUSD1Q9UJJ7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPUSD1Q9UJJ7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPUSD1Q9UJJ7 AC142472.1-201ENST00000612013 1741 ntBASIC20.29■□□□□ 0.84
RPUSD1Q9UJJ7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPUSD1Q9UJJ7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPUSD1Q9UJJ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.29■□□□□ 0.84
RPUSD1Q9UJJ7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.28■□□□□ 0.84
RPUSD1Q9UJJ7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPUSD1Q9UJJ7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.28■□□□□ 0.84
RPUSD1Q9UJJ7 MIR3960-201ENST00000583311 91 ntBASIC20.28■□□□□ 0.84
RPUSD1Q9UJJ7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RPUSD1Q9UJJ7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPUSD1Q9UJJ7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPUSD1Q9UJJ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RPUSD1Q9UJJ7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
RPUSD1Q9UJJ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPUSD1Q9UJJ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPUSD1Q9UJJ7 RP9P-202ENST00000450133 1212 ntBASIC20.26■□□□□ 0.83
RPUSD1Q9UJJ7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms