Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.87■■□□□ 1.09
SEC61A2Q9H9S3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SEC61A2Q9H9S3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SEC61A2Q9H9S3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SEC61A2Q9H9S3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SEC61A2Q9H9S3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.86■■□□□ 1.09
SEC61A2Q9H9S3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.86■■□□□ 1.09
SEC61A2Q9H9S3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SEC61A2Q9H9S3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SEC61A2Q9H9S3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.83■■□□□ 1.09
SEC61A2Q9H9S3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SEC61A2Q9H9S3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SEC61A2Q9H9S3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SEC61A2Q9H9S3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SEC61A2Q9H9S3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.83■■□□□ 1.09
SEC61A2Q9H9S3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEC61A2Q9H9S3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEC61A2Q9H9S3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.83■■□□□ 1.08
SEC61A2Q9H9S3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.83■■□□□ 1.08
SEC61A2Q9H9S3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SEC61A2Q9H9S3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SEC61A2Q9H9S3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEC61A2Q9H9S3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 AC142472.1-201ENST00000612013 1741 ntBASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SEC61A2Q9H9S3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A2Q9H9S3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEC61A2Q9H9S3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.79■■□□□ 1.08
SEC61A2Q9H9S3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEC61A2Q9H9S3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 AL359258.2-201ENST00000564063 1566 ntBASIC21.77■■□□□ 1.08
SEC61A2Q9H9S3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 HSD17B1P1-201ENST00000590052 955 ntBASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEC61A2Q9H9S3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SEC61A2Q9H9S3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEC61A2Q9H9S3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SEC61A2Q9H9S3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.75■■□□□ 1.07
SEC61A2Q9H9S3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.75■■□□□ 1.07
SEC61A2Q9H9S3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SEC61A2Q9H9S3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms