Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CBWD1Q9BRT8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.91■■□□□ 1.9
CBWD1Q9BRT8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CBWD1Q9BRT8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CBWD1Q9BRT8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CBWD1Q9BRT8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.9■■□□□ 1.9
CBWD1Q9BRT8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CBWD1Q9BRT8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CBWD1Q9BRT8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CBWD1Q9BRT8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CBWD1Q9BRT8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
CBWD1Q9BRT8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.89
CBWD1Q9BRT8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CBWD1Q9BRT8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.88■■□□□ 1.89
CBWD1Q9BRT8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.88■■□□□ 1.89
CBWD1Q9BRT8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CBWD1Q9BRT8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD1Q9BRT8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.86■■□□□ 1.89
CBWD1Q9BRT8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CBWD1Q9BRT8 HSD17B1P1-201ENST00000590052 955 ntBASIC26.86■■□□□ 1.89
CBWD1Q9BRT8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CBWD1Q9BRT8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.85■■□□□ 1.89
CBWD1Q9BRT8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.85■■□□□ 1.89
CBWD1Q9BRT8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.85■■□□□ 1.89
CBWD1Q9BRT8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CBWD1Q9BRT8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CBWD1Q9BRT8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
CBWD1Q9BRT8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CBWD1Q9BRT8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CBWD1Q9BRT8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.82■■□□□ 1.88
CBWD1Q9BRT8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CBWD1Q9BRT8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.82■■□□□ 1.88
CBWD1Q9BRT8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CBWD1Q9BRT8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CBWD1Q9BRT8 ECEL1P2-201ENST00000461596 1295 ntBASIC26.81■■□□□ 1.88
CBWD1Q9BRT8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.81■■□□□ 1.88
CBWD1Q9BRT8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CBWD1Q9BRT8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CBWD1Q9BRT8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.79■■□□□ 1.88
CBWD1Q9BRT8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.79■■□□□ 1.88
CBWD1Q9BRT8 AC025884.2-201ENST00000553429 711 ntBASIC26.79■■□□□ 1.88
CBWD1Q9BRT8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CBWD1Q9BRT8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
CBWD1Q9BRT8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CBWD1Q9BRT8 RNF126P1-201ENST00000567452 1320 ntBASIC26.77■■□□□ 1.88
CBWD1Q9BRT8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
CBWD1Q9BRT8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.77■■□□□ 1.88
CBWD1Q9BRT8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.77■■□□□ 1.88
CBWD1Q9BRT8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CBWD1Q9BRT8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CBWD1Q9BRT8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.76■■□□□ 1.87
CBWD1Q9BRT8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.76■■□□□ 1.87
CBWD1Q9BRT8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CBWD1Q9BRT8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CBWD1Q9BRT8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CBWD1Q9BRT8 SMPD5-203ENST00000639008 1464 ntBASIC26.75■■□□□ 1.87
CBWD1Q9BRT8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CBWD1Q9BRT8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CBWD1Q9BRT8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.75■■□□□ 1.87
CBWD1Q9BRT8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.74■■□□□ 1.87
CBWD1Q9BRT8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CBWD1Q9BRT8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD1Q9BRT8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms