Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CNTNAP3BQ96NU0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CNTNAP3BQ96NU0 BX664725.1-201ENST00000438252 379 ntBASIC23.69■■□□□ 1.38
CNTNAP3BQ96NU0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.69■■□□□ 1.38
CNTNAP3BQ96NU0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNTNAP3BQ96NU0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.68■■□□□ 1.38
CNTNAP3BQ96NU0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.67■■□□□ 1.38
CNTNAP3BQ96NU0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNTNAP3BQ96NU0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNTNAP3BQ96NU0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CNTNAP3BQ96NU0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNTNAP3BQ96NU0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 TSPY9P-201ENST00000440215 945 ntBASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 TSPY11P-201ENST00000442607 1045 ntBASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNTNAP3BQ96NU0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNTNAP3BQ96NU0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.65■■□□□ 1.38
CNTNAP3BQ96NU0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.65■■□□□ 1.38
CNTNAP3BQ96NU0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.65■■□□□ 1.38
CNTNAP3BQ96NU0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNTNAP3BQ96NU0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNTNAP3BQ96NU0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNTNAP3BQ96NU0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNTNAP3BQ96NU0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
CNTNAP3BQ96NU0 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.64■■□□□ 1.37
CNTNAP3BQ96NU0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CNTNAP3BQ96NU0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.63■■□□□ 1.37
CNTNAP3BQ96NU0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNTNAP3BQ96NU0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
CNTNAP3BQ96NU0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNTNAP3BQ96NU0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNTNAP3BQ96NU0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.62■■□□□ 1.37
CNTNAP3BQ96NU0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.62■■□□□ 1.37
CNTNAP3BQ96NU0 AC010864.1-201ENST00000609407 1511 ntBASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 AC019171.1-201ENST00000601251 1056 ntBASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CNTNAP3BQ96NU0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.6■■□□□ 1.37
CNTNAP3BQ96NU0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.59■■□□□ 1.37
CNTNAP3BQ96NU0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.59■■□□□ 1.37
CNTNAP3BQ96NU0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNTNAP3BQ96NU0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CNTNAP3BQ96NU0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.58■■□□□ 1.37
CNTNAP3BQ96NU0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CNTNAP3BQ96NU0 AC142381.2-201ENST00000566120 298 ntBASIC23.58■■□□□ 1.37
CNTNAP3BQ96NU0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
CNTNAP3BQ96NU0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CNTNAP3BQ96NU0 AL359258.2-201ENST00000564063 1566 ntBASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 AC127502.1-201ENST00000399971 1502 ntBASIC23.57■■□□□ 1.36
CNTNAP3BQ96NU0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNTNAP3BQ96NU0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CNTNAP3BQ96NU0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.55■■□□□ 1.36
CNTNAP3BQ96NU0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CNTNAP3BQ96NU0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.54■■□□□ 1.36
CNTNAP3BQ96NU0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNTNAP3BQ96NU0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNTNAP3BQ96NU0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNTNAP3BQ96NU0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNTNAP3BQ96NU0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNTNAP3BQ96NU0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNTNAP3BQ96NU0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.52■■□□□ 1.36
CNTNAP3BQ96NU0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CNTNAP3BQ96NU0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.52■■□□□ 1.36
CNTNAP3BQ96NU0 AC090192.1-201ENST00000517740 490 ntBASIC23.52■■□□□ 1.36
CNTNAP3BQ96NU0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CNTNAP3BQ96NU0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CNTNAP3BQ96NU0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNTNAP3BQ96NU0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms