Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
ECHDC3Q96DC8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC3Q96DC8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.7■■□□□ 1.54
ECHDC3Q96DC8 MIR3960-201ENST00000583311 91 ntBASIC24.7■■□□□ 1.54
ECHDC3Q96DC8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC3Q96DC8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC3Q96DC8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ECHDC3Q96DC8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.68■■□□□ 1.54
ECHDC3Q96DC8 RP9P-202ENST00000450133 1212 ntBASIC24.68■■□□□ 1.54
ECHDC3Q96DC8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.68■■□□□ 1.54
ECHDC3Q96DC8 AP004609.3-201ENST00000610705 1884 ntBASIC24.67■■□□□ 1.54
ECHDC3Q96DC8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC3Q96DC8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC3Q96DC8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC3Q96DC8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC3Q96DC8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
ECHDC3Q96DC8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
ECHDC3Q96DC8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ECHDC3Q96DC8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ECHDC3Q96DC8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ECHDC3Q96DC8 U85056.1-201ENST00000616429 682 ntBASIC24.65■■□□□ 1.54
ECHDC3Q96DC8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ECHDC3Q96DC8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.64■■□□□ 1.54
ECHDC3Q96DC8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ECHDC3Q96DC8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ECHDC3Q96DC8 NTF6A-201ENST00000591175 560 ntBASIC24.64■■□□□ 1.54
ECHDC3Q96DC8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.64■■□□□ 1.53
ECHDC3Q96DC8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ECHDC3Q96DC8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ECHDC3Q96DC8 AC093536.1-201ENST00000569153 554 ntBASIC24.63■■□□□ 1.53
ECHDC3Q96DC8 AC026202.3-201ENST00000600805 1127 ntBASIC24.63■■□□□ 1.53
ECHDC3Q96DC8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
ECHDC3Q96DC8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.63■■□□□ 1.53
ECHDC3Q96DC8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 AC009831.1-201ENST00000580420 1582 ntBASIC24.62■■□□□ 1.53
ECHDC3Q96DC8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 RAP2CP1-202ENST00000605179 643 ntBASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC3Q96DC8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.59■■□□□ 1.53
ECHDC3Q96DC8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.59■■□□□ 1.53
ECHDC3Q96DC8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.59■■□□□ 1.53
ECHDC3Q96DC8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ECHDC3Q96DC8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ECHDC3Q96DC8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.58■■□□□ 1.53
ECHDC3Q96DC8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.58■■□□□ 1.53
ECHDC3Q96DC8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ECHDC3Q96DC8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ECHDC3Q96DC8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ECHDC3Q96DC8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ECHDC3Q96DC8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
ECHDC3Q96DC8 AC133552.2-201ENST00000619106 1032 ntBASIC24.57■■□□□ 1.52
ECHDC3Q96DC8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ECHDC3Q96DC8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
ECHDC3Q96DC8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.56■■□□□ 1.52
ECHDC3Q96DC8 AL121749.1-202ENST00000609313 2153 ntBASIC24.56■■□□□ 1.52
ECHDC3Q96DC8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
ECHDC3Q96DC8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ECHDC3Q96DC8 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.56■■□□□ 1.52
ECHDC3Q96DC8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ECHDC3Q96DC8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
ECHDC3Q96DC8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
ECHDC3Q96DC8 KRT18P60-201ENST00000312876 1297 ntBASIC24.54■■□□□ 1.52
ECHDC3Q96DC8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms