Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.5■■■□□ 2.47
SNED1Q8TER0 AC131212.1-201ENST00000613771 668 ntBASIC30.5■■■□□ 2.47
SNED1Q8TER0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SNED1Q8TER0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.5■■■□□ 2.47
SNED1Q8TER0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SNED1Q8TER0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.49■■■□□ 2.47
SNED1Q8TER0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SNED1Q8TER0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.49■■■□□ 2.47
SNED1Q8TER0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNED1Q8TER0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.48■■■□□ 2.47
SNED1Q8TER0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.48■■■□□ 2.47
SNED1Q8TER0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.48■■■□□ 2.47
SNED1Q8TER0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.48■■■□□ 2.47
SNED1Q8TER0 AP002414.2-202ENST00000590929 1450 ntBASIC30.47■■■□□ 2.47
SNED1Q8TER0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SNED1Q8TER0 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.46■■■□□ 2.47
SNED1Q8TER0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.46■■■□□ 2.47
SNED1Q8TER0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SNED1Q8TER0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.46
SNED1Q8TER0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
SNED1Q8TER0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNED1Q8TER0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SNED1Q8TER0 AC018755.3-202ENST00000596210 929 ntBASIC30.43■■■□□ 2.46
SNED1Q8TER0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNED1Q8TER0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
SNED1Q8TER0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
SNED1Q8TER0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNED1Q8TER0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNED1Q8TER0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SNED1Q8TER0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SNED1Q8TER0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.41■■■□□ 2.46
SNED1Q8TER0 AL356441.2-201ENST00000443009 864 ntBASIC30.41■■■□□ 2.46
SNED1Q8TER0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.41■■■□□ 2.46
SNED1Q8TER0 ABCB10P3-201ENST00000561950 2166 ntBASIC30.41■■■□□ 2.46
SNED1Q8TER0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNED1Q8TER0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNED1Q8TER0 AL359504.2-201ENST00000605506 1601 ntBASIC30.4■■■□□ 2.46
SNED1Q8TER0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNED1Q8TER0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
SNED1Q8TER0 AL031848.2-201ENST00000607670 837 ntBASIC30.39■■■□□ 2.46
SNED1Q8TER0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SNED1Q8TER0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SNED1Q8TER0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
SNED1Q8TER0 AL139393.2-201ENST00000608721 2025 ntBASIC30.38■■■□□ 2.45
SNED1Q8TER0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNED1Q8TER0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.38■■■□□ 2.45
SNED1Q8TER0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SNED1Q8TER0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.37■■■□□ 2.45
SNED1Q8TER0 AC019171.1-201ENST00000601251 1056 ntBASIC30.37■■■□□ 2.45
SNED1Q8TER0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
SNED1Q8TER0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.37■■■□□ 2.45
SNED1Q8TER0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SNED1Q8TER0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNED1Q8TER0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.36■■■□□ 2.45
SNED1Q8TER0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.36■■■□□ 2.45
SNED1Q8TER0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SNED1Q8TER0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SNED1Q8TER0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.35■■■□□ 2.45
SNED1Q8TER0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.35■■■□□ 2.45
SNED1Q8TER0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNED1Q8TER0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.33■■■□□ 2.45
SNED1Q8TER0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.33■■■□□ 2.45
SNED1Q8TER0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
SNED1Q8TER0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNED1Q8TER0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.32■■■□□ 2.44
SNED1Q8TER0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNED1Q8TER0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNED1Q8TER0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNED1Q8TER0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SNED1Q8TER0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.3■■■□□ 2.44
SNED1Q8TER0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNED1Q8TER0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNED1Q8TER0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.3■■■□□ 2.44
SNED1Q8TER0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNED1Q8TER0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNED1Q8TER0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.29■■■□□ 2.44
SNED1Q8TER0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNED1Q8TER0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.29■■■□□ 2.44
SNED1Q8TER0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.28■■■□□ 2.44
SNED1Q8TER0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.28■■■□□ 2.44
SNED1Q8TER0 AC087393.1-201ENST00000582896 145 ntBASIC30.28■■■□□ 2.44
SNED1Q8TER0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SNED1Q8TER0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.27■■■□□ 2.44
SNED1Q8TER0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SNED1Q8TER0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
SNED1Q8TER0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SNED1Q8TER0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SNED1Q8TER0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
SNED1Q8TER0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.26■■■□□ 2.43
SNED1Q8TER0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SNED1Q8TER0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.26■■■□□ 2.43
SNED1Q8TER0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
SNED1Q8TER0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.25■■■□□ 2.43
SNED1Q8TER0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
SNED1Q8TER0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SNED1Q8TER0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNED1Q8TER0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.24■■■□□ 2.43
SNED1Q8TER0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNED1Q8TER0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SNED1Q8TER0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms