Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHKBP1Q8TBC3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHKBP1Q8TBC3 SPCS2P3-201ENST00000500401 656 ntBASIC25.86■■□□□ 1.73
SHKBP1Q8TBC3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
SHKBP1Q8TBC3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHKBP1Q8TBC3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHKBP1Q8TBC3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHKBP1Q8TBC3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.85■■□□□ 1.73
SHKBP1Q8TBC3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHKBP1Q8TBC3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHKBP1Q8TBC3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SHKBP1Q8TBC3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.84■■□□□ 1.73
SHKBP1Q8TBC3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
SHKBP1Q8TBC3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.83■■□□□ 1.73
SHKBP1Q8TBC3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHKBP1Q8TBC3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHKBP1Q8TBC3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SHKBP1Q8TBC3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHKBP1Q8TBC3 AL359504.2-201ENST00000605506 1601 ntBASIC25.81■■□□□ 1.72
SHKBP1Q8TBC3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SHKBP1Q8TBC3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SHKBP1Q8TBC3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SHKBP1Q8TBC3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SHKBP1Q8TBC3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
SHKBP1Q8TBC3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SHKBP1Q8TBC3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHKBP1Q8TBC3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHKBP1Q8TBC3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.79■■□□□ 1.72
SHKBP1Q8TBC3 WHAMMP3-201ENST00000611636 1609 ntBASIC25.78■■□□□ 1.72
SHKBP1Q8TBC3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHKBP1Q8TBC3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHKBP1Q8TBC3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.78■■□□□ 1.72
SHKBP1Q8TBC3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SHKBP1Q8TBC3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SHKBP1Q8TBC3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.77■■□□□ 1.72
SHKBP1Q8TBC3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SHKBP1Q8TBC3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SHKBP1Q8TBC3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.76■■□□□ 1.71
SHKBP1Q8TBC3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SHKBP1Q8TBC3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 MIR6765-201ENST00000614092 87 ntBASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHKBP1Q8TBC3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SHKBP1Q8TBC3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
SHKBP1Q8TBC3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.73■■□□□ 1.71
SHKBP1Q8TBC3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHKBP1Q8TBC3 AC010980.1-201ENST00000587192 1142 ntBASIC25.73■■□□□ 1.71
SHKBP1Q8TBC3 BHLHE23-202ENST00000612929 1109 ntBASIC25.73■■□□□ 1.71
SHKBP1Q8TBC3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHKBP1Q8TBC3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHKBP1Q8TBC3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHKBP1Q8TBC3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHKBP1Q8TBC3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHKBP1Q8TBC3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.71■■□□□ 1.71
SHKBP1Q8TBC3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHKBP1Q8TBC3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.71■■□□□ 1.71
SHKBP1Q8TBC3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SHKBP1Q8TBC3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHKBP1Q8TBC3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.7■■□□□ 1.7
SHKBP1Q8TBC3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.7■■□□□ 1.7
SHKBP1Q8TBC3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SHKBP1Q8TBC3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SHKBP1Q8TBC3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SHKBP1Q8TBC3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHKBP1Q8TBC3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.69■■□□□ 1.7
SHKBP1Q8TBC3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.69■■□□□ 1.7
SHKBP1Q8TBC3 AC018755.3-202ENST00000596210 929 ntBASIC25.69■■□□□ 1.7
SHKBP1Q8TBC3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.69■■□□□ 1.7
SHKBP1Q8TBC3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHKBP1Q8TBC3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 AL451085.2-201ENST00000605085 799 ntBASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.68■■□□□ 1.7
SHKBP1Q8TBC3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHKBP1Q8TBC3 AC139795.1-202ENST00000500444 432 ntBASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms