Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC142472.1-201ENST00000612013 1741 ntBASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.31■■□□□ 1.32
ARHGEF39Q8N4T4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 U85056.1-201ENST00000616429 682 ntBASIC23.3■■□□□ 1.32
ARHGEF39Q8N4T4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 RP9P-202ENST00000450133 1212 ntBASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 MIR3960-201ENST00000583311 91 ntBASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.28■■□□□ 1.32
ARHGEF39Q8N4T4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 NTF6A-201ENST00000591175 560 ntBASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 AC026202.3-201ENST00000600805 1127 ntBASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.27■■□□□ 1.32
ARHGEF39Q8N4T4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.27■■□□□ 1.31
ARHGEF39Q8N4T4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 AP004609.3-201ENST00000610705 1884 ntBASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 RAP2CP1-202ENST00000605179 643 ntBASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 AC009831.1-201ENST00000580420 1582 ntBASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ARHGEF39Q8N4T4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
ARHGEF39Q8N4T4 AC093536.1-201ENST00000569153 554 ntBASIC23.25■■□□□ 1.31
ARHGEF39Q8N4T4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF39Q8N4T4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ARHGEF39Q8N4T4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF39Q8N4T4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.24■■□□□ 1.31
ARHGEF39Q8N4T4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF39Q8N4T4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF39Q8N4T4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.24■■□□□ 1.31
ARHGEF39Q8N4T4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.23■■□□□ 1.31
ARHGEF39Q8N4T4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF39Q8N4T4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ARHGEF39Q8N4T4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ARHGEF39Q8N4T4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ARHGEF39Q8N4T4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
ARHGEF39Q8N4T4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ARHGEF39Q8N4T4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 KRT18P60-201ENST00000312876 1297 ntBASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.2■■□□□ 1.3
ARHGEF39Q8N4T4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ARHGEF39Q8N4T4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.19■■□□□ 1.3
ARHGEF39Q8N4T4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ARHGEF39Q8N4T4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ARHGEF39Q8N4T4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ARHGEF39Q8N4T4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.19■■□□□ 1.3
ARHGEF39Q8N4T4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 AC133552.2-201ENST00000619106 1032 ntBASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 AL121749.1-202ENST00000609313 2153 ntBASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ARHGEF39Q8N4T4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
ARHGEF39Q8N4T4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
ARHGEF39Q8N4T4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF39Q8N4T4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
ARHGEF39Q8N4T4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ARHGEF39Q8N4T4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms