Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
PROM2Q8N271 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC32.09■■■□□ 2.73
PROM2Q8N271 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.09■■■□□ 2.73
PROM2Q8N271 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC32.08■■■□□ 2.73
PROM2Q8N271 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PROM2Q8N271 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.07■■■□□ 2.73
PROM2Q8N271 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
PROM2Q8N271 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.06■■■□□ 2.72
PROM2Q8N271 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
PROM2Q8N271 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PROM2Q8N271 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PROM2Q8N271 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.05■■■□□ 2.72
PROM2Q8N271 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PROM2Q8N271 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC32.04■■■□□ 2.72
PROM2Q8N271 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
PROM2Q8N271 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.04■■■□□ 2.72
PROM2Q8N271 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PROM2Q8N271 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
PROM2Q8N271 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
PROM2Q8N271 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PROM2Q8N271 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PROM2Q8N271 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PROM2Q8N271 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PROM2Q8N271 UNC93B8-201ENST00000511903 705 ntBASIC32.02■■■□□ 2.72
PROM2Q8N271 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.02■■■□□ 2.72
PROM2Q8N271 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC32.02■■■□□ 2.72
PROM2Q8N271 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.02■■■□□ 2.72
PROM2Q8N271 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.02■■■□□ 2.72
PROM2Q8N271 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.01■■■□□ 2.71
PROM2Q8N271 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PROM2Q8N271 RALB-208ENST00000631312 311 ntTSL 5 BASIC32.01■■■□□ 2.71
PROM2Q8N271 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PROM2Q8N271 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
PROM2Q8N271 AC087393.1-201ENST00000582896 145 ntBASIC32■■■□□ 2.71
PROM2Q8N271 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32■■■□□ 2.71
PROM2Q8N271 AL139246.5-201ENST00000606645 996 ntBASIC32■■■□□ 2.71
PROM2Q8N271 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
PROM2Q8N271 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PROM2Q8N271 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.99■■■□□ 2.71
PROM2Q8N271 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PROM2Q8N271 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PROM2Q8N271 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PROM2Q8N271 AP004833.2-201ENST00000532228 1454 ntBASIC31.98■■■□□ 2.71
PROM2Q8N271 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PROM2Q8N271 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.98■■■□□ 2.71
PROM2Q8N271 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PROM2Q8N271 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.98■■■□□ 2.71
PROM2Q8N271 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PROM2Q8N271 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
PROM2Q8N271 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PROM2Q8N271 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PROM2Q8N271 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
PROM2Q8N271 MIR4787-201ENST00000607364 84 ntBASIC31.97■■■□□ 2.71
PROM2Q8N271 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
PROM2Q8N271 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PROM2Q8N271 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PROM2Q8N271 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.71
PROM2Q8N271 LONRF2P2-201ENST00000439212 571 ntBASIC31.95■■■□□ 2.71
PROM2Q8N271 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PROM2Q8N271 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
PROM2Q8N271 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PROM2Q8N271 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.94■■■□□ 2.7
PROM2Q8N271 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PROM2Q8N271 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PROM2Q8N271 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.94■■■□□ 2.7
PROM2Q8N271 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.94■■■□□ 2.7
PROM2Q8N271 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
PROM2Q8N271 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PROM2Q8N271 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.93■■■□□ 2.7
PROM2Q8N271 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PROM2Q8N271 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PROM2Q8N271 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.91■■■□□ 2.7
PROM2Q8N271 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PROM2Q8N271 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.91■■■□□ 2.7
PROM2Q8N271 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.91■■■□□ 2.7
PROM2Q8N271 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.9■■■□□ 2.7
PROM2Q8N271 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PROM2Q8N271 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
PROM2Q8N271 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PROM2Q8N271 AL359504.2-201ENST00000605506 1601 ntBASIC31.89■■■□□ 2.7
PROM2Q8N271 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.88■■■□□ 2.69
PROM2Q8N271 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.88■■■□□ 2.69
PROM2Q8N271 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PROM2Q8N271 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PROM2Q8N271 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.87■■■□□ 2.69
PROM2Q8N271 KRT125P-201ENST00000546827 989 ntBASIC31.87■■■□□ 2.69
PROM2Q8N271 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.87■■■□□ 2.69
PROM2Q8N271 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PROM2Q8N271 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
PROM2Q8N271 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.86■■■□□ 2.69
PROM2Q8N271 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.85■■■□□ 2.69
PROM2Q8N271 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
PROM2Q8N271 KRT16P3-201ENST00000439127 1283 ntBASIC31.85■■■□□ 2.69
PROM2Q8N271 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PROM2Q8N271 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PROM2Q8N271 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PROM2Q8N271 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.84■■■□□ 2.69
PROM2Q8N271 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.83■■■□□ 2.69
PROM2Q8N271 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PROM2Q8N271 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms