Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CCDC144CPQ8IYA2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CCDC144CPQ8IYA2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CCDC144CPQ8IYA2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CCDC144CPQ8IYA2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
CCDC144CPQ8IYA2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
CCDC144CPQ8IYA2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
CCDC144CPQ8IYA2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
CCDC144CPQ8IYA2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.95■■■□□ 2.22
CCDC144CPQ8IYA2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CCDC144CPQ8IYA2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.94■■■□□ 2.22
CCDC144CPQ8IYA2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CCDC144CPQ8IYA2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CCDC144CPQ8IYA2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.93■■■□□ 2.22
CCDC144CPQ8IYA2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
CCDC144CPQ8IYA2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.93■■■□□ 2.22
CCDC144CPQ8IYA2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
CCDC144CPQ8IYA2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CCDC144CPQ8IYA2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CCDC144CPQ8IYA2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
CCDC144CPQ8IYA2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CCDC144CPQ8IYA2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CCDC144CPQ8IYA2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.92■■■□□ 2.22
CCDC144CPQ8IYA2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.91■■■□□ 2.22
CCDC144CPQ8IYA2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
CCDC144CPQ8IYA2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCDC144CPQ8IYA2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCDC144CPQ8IYA2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.91■■■□□ 2.22
CCDC144CPQ8IYA2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCDC144CPQ8IYA2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144CPQ8IYA2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
CCDC144CPQ8IYA2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144CPQ8IYA2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
CCDC144CPQ8IYA2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144CPQ8IYA2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144CPQ8IYA2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144CPQ8IYA2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144CPQ8IYA2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
CCDC144CPQ8IYA2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC144CPQ8IYA2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144CPQ8IYA2 AC012354.3-201ENST00000623734 483 ntBASIC28.87■■■□□ 2.21
CCDC144CPQ8IYA2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144CPQ8IYA2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.86■■■□□ 2.21
CCDC144CPQ8IYA2 AP004609.3-201ENST00000610705 1884 ntBASIC28.86■■■□□ 2.21
CCDC144CPQ8IYA2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144CPQ8IYA2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.85■■■□□ 2.21
CCDC144CPQ8IYA2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.85■■■□□ 2.21
CCDC144CPQ8IYA2 AC126177.7-201ENST00000547904 679 ntBASIC28.85■■■□□ 2.21
CCDC144CPQ8IYA2 AC092296.2-201ENST00000589470 999 ntBASIC28.85■■■□□ 2.21
CCDC144CPQ8IYA2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
CCDC144CPQ8IYA2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC144CPQ8IYA2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.84■■■□□ 2.21
CCDC144CPQ8IYA2 U85056.1-201ENST00000616429 682 ntBASIC28.84■■■□□ 2.21
CCDC144CPQ8IYA2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144CPQ8IYA2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.84■■■□□ 2.21
CCDC144CPQ8IYA2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144CPQ8IYA2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144CPQ8IYA2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144CPQ8IYA2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.82■■■□□ 2.2
CCDC144CPQ8IYA2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.82■■■□□ 2.2
CCDC144CPQ8IYA2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144CPQ8IYA2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144CPQ8IYA2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144CPQ8IYA2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144CPQ8IYA2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.8■■■□□ 2.2
CCDC144CPQ8IYA2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC144CPQ8IYA2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC144CPQ8IYA2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC144CPQ8IYA2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.8■■■□□ 2.2
CCDC144CPQ8IYA2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 AL157400.5-201ENST00000507624 621 ntBASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144CPQ8IYA2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC144CPQ8IYA2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144CPQ8IYA2 AL359504.2-201ENST00000605506 1601 ntBASIC28.77■■■□□ 2.2
CCDC144CPQ8IYA2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.77■■■□□ 2.2
CCDC144CPQ8IYA2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144CPQ8IYA2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.77■■■□□ 2.2
CCDC144CPQ8IYA2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144CPQ8IYA2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC144CPQ8IYA2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC144CPQ8IYA2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC144CPQ8IYA2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
CCDC144CPQ8IYA2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC144CPQ8IYA2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC144CPQ8IYA2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC144CPQ8IYA2 AC142472.1-201ENST00000612013 1741 ntBASIC28.74■■■□□ 2.19
CCDC144CPQ8IYA2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
CCDC144CPQ8IYA2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144CPQ8IYA2 ECEL1P2-201ENST00000461596 1295 ntBASIC28.74■■■□□ 2.19
CCDC144CPQ8IYA2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.74■■■□□ 2.19
CCDC144CPQ8IYA2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.74■■■□□ 2.19
CCDC144CPQ8IYA2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC144CPQ8IYA2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms