Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CPNE8Q86YQ8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.78■■□□□ 1.72
CPNE8Q86YQ8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
CPNE8Q86YQ8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.78■■□□□ 1.72
CPNE8Q86YQ8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CPNE8Q86YQ8 AC148477.6-201ENST00000623746 465 ntBASIC25.78■■□□□ 1.72
CPNE8Q86YQ8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 DUSP8P4-201ENST00000399538 1761 ntBASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CPNE8Q86YQ8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.76■■□□□ 1.71
CPNE8Q86YQ8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE8Q86YQ8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE8Q86YQ8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CPNE8Q86YQ8 AC020928.2-201ENST00000588717 2197 ntBASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 ERN1-208ENST00000606895 2068 ntBASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 AC008813.1-201ENST00000536597 885 ntBASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CPNE8Q86YQ8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CPNE8Q86YQ8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.74■■□□□ 1.71
CPNE8Q86YQ8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.73■■□□□ 1.71
CPNE8Q86YQ8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CPNE8Q86YQ8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CPNE8Q86YQ8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.72■■□□□ 1.71
CPNE8Q86YQ8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.72■■□□□ 1.71
CPNE8Q86YQ8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.72■■□□□ 1.71
CPNE8Q86YQ8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CPNE8Q86YQ8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CPNE8Q86YQ8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 MIR3648-2-201ENST00000581792 180 ntBASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 MIR3648-1-201ENST00000615959 180 ntBASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CPNE8Q86YQ8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CPNE8Q86YQ8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
CPNE8Q86YQ8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.7■■□□□ 1.7
CPNE8Q86YQ8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.7■■□□□ 1.7
CPNE8Q86YQ8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPNE8Q86YQ8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CPNE8Q86YQ8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.69■■□□□ 1.7
CPNE8Q86YQ8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CPNE8Q86YQ8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 AC016575.1-201ENST00000607026 382 ntBASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CPNE8Q86YQ8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 AL359258.2-201ENST00000564063 1566 ntBASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPNE8Q86YQ8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPNE8Q86YQ8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPNE8Q86YQ8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPNE8Q86YQ8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.65■■□□□ 1.7
CPNE8Q86YQ8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CPNE8Q86YQ8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPNE8Q86YQ8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.65■■□□□ 1.7
CPNE8Q86YQ8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
CPNE8Q86YQ8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
CPNE8Q86YQ8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CPNE8Q86YQ8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPNE8Q86YQ8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms