Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM1Q86UE6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM1Q86UE6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM1Q86UE6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.22■□□□□ 0.99
LRRTM1Q86UE6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRRTM1Q86UE6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM1Q86UE6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRTM1Q86UE6 MIR3665-201ENST00000578708 105 ntBASIC21.21■□□□□ 0.99
LRRTM1Q86UE6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRTM1Q86UE6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM1Q86UE6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM1Q86UE6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM1Q86UE6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRRTM1Q86UE6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRTM1Q86UE6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRTM1Q86UE6 AC142381.3-201ENST00000568208 1670 ntBASIC21.18■□□□□ 0.98
LRRTM1Q86UE6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM1Q86UE6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.18■□□□□ 0.98
LRRTM1Q86UE6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRTM1Q86UE6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRTM1Q86UE6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LRRTM1Q86UE6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM1Q86UE6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM1Q86UE6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM1Q86UE6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM1Q86UE6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM1Q86UE6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
LRRTM1Q86UE6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM1Q86UE6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
LRRTM1Q86UE6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM1Q86UE6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM1Q86UE6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM1Q86UE6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM1Q86UE6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LRRTM1Q86UE6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM1Q86UE6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.13■□□□□ 0.97
LRRTM1Q86UE6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM1Q86UE6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM1Q86UE6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM1Q86UE6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LRRTM1Q86UE6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM1Q86UE6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM1Q86UE6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM1Q86UE6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRTM1Q86UE6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM1Q86UE6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRTM1Q86UE6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM1Q86UE6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM1Q86UE6 AC087741.3-201ENST00000624270 1347 ntBASIC21.09■□□□□ 0.97
LRRTM1Q86UE6 AC022211.4-201ENST00000625094 2161 ntBASIC21.09■□□□□ 0.97
LRRTM1Q86UE6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM1Q86UE6 AC138932.3-201ENST00000567634 1902 ntBASIC21.09■□□□□ 0.97
LRRTM1Q86UE6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRTM1Q86UE6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM1Q86UE6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM1Q86UE6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM1Q86UE6 AP006261.1-201ENST00000584783 668 ntBASIC21.08■□□□□ 0.97
LRRTM1Q86UE6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRTM1Q86UE6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRTM1Q86UE6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LRRTM1Q86UE6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.08■□□□□ 0.96
LRRTM1Q86UE6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.08■□□□□ 0.96
LRRTM1Q86UE6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
LRRTM1Q86UE6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRTM1Q86UE6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms