Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB5BP61020 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB5BP61020 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5BP61020 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5BP61020 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5BP61020 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5BP61020 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB5BP61020 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RAB5BP61020 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB5BP61020 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RAB5BP61020 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5BP61020 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB5BP61020 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5BP61020 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB5BP61020 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB5BP61020 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB5BP61020 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB5BP61020 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB5BP61020 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB5BP61020 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RAB5BP61020 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB5BP61020 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
RAB5BP61020 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB5BP61020 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB5BP61020 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB5BP61020 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
RAB5BP61020 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB5BP61020 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB5BP61020 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB5BP61020 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RAB5BP61020 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB5BP61020 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RAB5BP61020 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB5BP61020 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB5BP61020 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB5BP61020 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB5BP61020 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB5BP61020 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB5BP61020 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB5BP61020 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB5BP61020 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB5BP61020 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB5BP61020 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB5BP61020 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB5BP61020 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RAB5BP61020 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB5BP61020 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB5BP61020 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB5BP61020 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RAB5BP61020 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB5BP61020 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB5BP61020 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB5BP61020 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB5BP61020 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB5BP61020 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB5BP61020 AC092803.2-201ENST00000564287 1899 ntBASIC19.22■□□□□ 0.67
RAB5BP61020 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB5BP61020 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB5BP61020 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB5BP61020 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAB5BP61020 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB5BP61020 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB5BP61020 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB5BP61020 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB5BP61020 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB5BP61020 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RAB5BP61020 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB5BP61020 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB5BP61020 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB5BP61020 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAB5BP61020 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB5BP61020 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB5BP61020 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
RAB5BP61020 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB5BP61020 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB5BP61020 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB5BP61020 AL139125.2-201ENST00000623134 1869 ntBASIC19.18■□□□□ 0.66
RAB5BP61020 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB5BP61020 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB5BP61020 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB5BP61020 AC142381.3-201ENST00000568208 1670 ntBASIC19.17■□□□□ 0.66
RAB5BP61020 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB5BP61020 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB5BP61020 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB5BP61020 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB5BP61020 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 314.3 ms