Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.64■■□□□ 1.05
FOXG1P55316 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXG1P55316 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXG1P55316 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXG1P55316 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXG1P55316 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXG1P55316 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.62■■□□□ 1.05
FOXG1P55316 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.62■■□□□ 1.05
FOXG1P55316 ABHD17AP5-201ENST00000580133 923 ntBASIC21.62■■□□□ 1.05
FOXG1P55316 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
FOXG1P55316 AP004609.3-201ENST00000610705 1884 ntBASIC21.62■■□□□ 1.05
FOXG1P55316 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXG1P55316 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
FOXG1P55316 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
FOXG1P55316 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXG1P55316 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXG1P55316 AC007029.1-201ENST00000604183 313 ntBASIC21.61■■□□□ 1.05
FOXG1P55316 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXG1P55316 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
FOXG1P55316 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXG1P55316 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXG1P55316 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXG1P55316 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXG1P55316 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.59■■□□□ 1.05
FOXG1P55316 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXG1P55316 U85056.1-201ENST00000616429 682 ntBASIC21.59■■□□□ 1.05
FOXG1P55316 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXG1P55316 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXG1P55316 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXG1P55316 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
FOXG1P55316 AL121749.1-202ENST00000609313 2153 ntBASIC21.58■■□□□ 1.05
FOXG1P55316 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXG1P55316 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXG1P55316 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
FOXG1P55316 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
FOXG1P55316 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXG1P55316 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
FOXG1P55316 AC142472.1-201ENST00000612013 1741 ntBASIC21.58■■□□□ 1.04
FOXG1P55316 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXG1P55316 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.57■■□□□ 1.04
FOXG1P55316 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXG1P55316 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FOXG1P55316 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
FOXG1P55316 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXG1P55316 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.56■■□□□ 1.04
FOXG1P55316 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
FOXG1P55316 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXG1P55316 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXG1P55316 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.56■■□□□ 1.04
FOXG1P55316 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXG1P55316 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
FOXG1P55316 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXG1P55316 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXG1P55316 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXG1P55316 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
FOXG1P55316 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
FOXG1P55316 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
FOXG1P55316 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXG1P55316 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.54■■□□□ 1.04
FOXG1P55316 RP9P-202ENST00000450133 1212 ntBASIC21.54■■□□□ 1.04
FOXG1P55316 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.54■■□□□ 1.04
FOXG1P55316 AC093536.1-201ENST00000569153 554 ntBASIC21.54■■□□□ 1.04
FOXG1P55316 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXG1P55316 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXG1P55316 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXG1P55316 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXG1P55316 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXG1P55316 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
FOXG1P55316 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXG1P55316 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXG1P55316 AC009831.1-201ENST00000580420 1582 ntBASIC21.53■■□□□ 1.04
FOXG1P55316 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXG1P55316 NTF6A-201ENST00000591175 560 ntBASIC21.52■■□□□ 1.04
FOXG1P55316 AC026202.3-201ENST00000600805 1127 ntBASIC21.52■■□□□ 1.04
FOXG1P55316 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXG1P55316 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXG1P55316 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
FOXG1P55316 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.52■■□□□ 1.03
FOXG1P55316 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXG1P55316 MIR3960-201ENST00000583311 91 ntBASIC21.51■■□□□ 1.03
FOXG1P55316 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXG1P55316 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXG1P55316 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXG1P55316 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
FOXG1P55316 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXG1P55316 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXG1P55316 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
FOXG1P55316 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXG1P55316 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXG1P55316 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
FOXG1P55316 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXG1P55316 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms