Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
APOC4P55056 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
APOC4P55056 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
APOC4P55056 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.02■□□□□ 0.47
APOC4P55056 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.01■□□□□ 0.47
APOC4P55056 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APOC4P55056 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOC4P55056 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOC4P55056 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOC4P55056 TSPY13P-201ENST00000338964 914 ntBASIC18.01■□□□□ 0.47
APOC4P55056 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.01■□□□□ 0.47
APOC4P55056 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APOC4P55056 AL592293.1-201ENST00000502889 1188 ntBASIC18■□□□□ 0.47
APOC4P55056 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APOC4P55056 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18■□□□□ 0.47
APOC4P55056 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
APOC4P55056 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APOC4P55056 BX255925.1-201ENST00000566954 1854 ntBASIC17.99■□□□□ 0.47
APOC4P55056 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.99■□□□□ 0.47
APOC4P55056 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.99■□□□□ 0.47
APOC4P55056 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
APOC4P55056 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 AL033527.3-201ENST00000566366 1196 ntBASIC17.98■□□□□ 0.47
APOC4P55056 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 AC142086.6-201ENST00000621154 1765 ntBASIC17.98■□□□□ 0.47
APOC4P55056 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOC4P55056 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APOC4P55056 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.97■□□□□ 0.47
APOC4P55056 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
APOC4P55056 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.97■□□□□ 0.47
APOC4P55056 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOC4P55056 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APOC4P55056 ATP5G2P3-201ENST00000429083 425 ntBASIC17.97■□□□□ 0.47
APOC4P55056 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
APOC4P55056 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOC4P55056 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
APOC4P55056 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
APOC4P55056 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
APOC4P55056 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOC4P55056 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
APOC4P55056 AC004987.1-201ENST00000428627 508 ntBASIC17.96■□□□□ 0.47
APOC4P55056 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOC4P55056 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOC4P55056 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.95■□□□□ 0.46
APOC4P55056 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
APOC4P55056 RAP2CP1-202ENST00000605179 643 ntBASIC17.95■□□□□ 0.46
APOC4P55056 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOC4P55056 AC129492.7-201ENST00000622992 756 ntBASIC17.95■□□□□ 0.46
APOC4P55056 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOC4P55056 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOC4P55056 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOC4P55056 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
APOC4P55056 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
APOC4P55056 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.95■□□□□ 0.46
APOC4P55056 AL449106.1-201ENST00000608517 1980 ntBASIC17.94■□□□□ 0.46
APOC4P55056 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOC4P55056 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
APOC4P55056 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
APOC4P55056 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.94■□□□□ 0.46
APOC4P55056 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
APOC4P55056 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
APOC4P55056 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.94■□□□□ 0.46
APOC4P55056 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
APOC4P55056 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
APOC4P55056 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.93■□□□□ 0.46
APOC4P55056 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.93■□□□□ 0.46
APOC4P55056 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC4P55056 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
APOC4P55056 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.92■□□□□ 0.46
APOC4P55056 AC018755.3-202ENST00000596210 929 ntBASIC17.92■□□□□ 0.46
APOC4P55056 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC4P55056 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC4P55056 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC4P55056 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC4P55056 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.91■□□□□ 0.46
APOC4P55056 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.91■□□□□ 0.46
APOC4P55056 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.91■□□□□ 0.46
APOC4P55056 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
APOC4P55056 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC4P55056 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC4P55056 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.9■□□□□ 0.46
APOC4P55056 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
APOC4P55056 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.9■□□□□ 0.46
APOC4P55056 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC4P55056 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC4P55056 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC4P55056 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APOC4P55056 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC4P55056 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms