Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCR9P51686 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCR9P51686 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCR9P51686 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCR9P51686 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.5■■□□□ 1.03
CCR9P51686 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCR9P51686 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.5■■□□□ 1.03
CCR9P51686 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCR9P51686 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCR9P51686 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCR9P51686 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
CCR9P51686 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCR9P51686 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCR9P51686 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCR9P51686 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCR9P51686 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CCR9P51686 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.48■■□□□ 1.03
CCR9P51686 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCR9P51686 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCR9P51686 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.48■■□□□ 1.03
CCR9P51686 AC021231.2-201ENST00000594613 730 ntBASIC21.48■■□□□ 1.03
CCR9P51686 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCR9P51686 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.48■■□□□ 1.03
CCR9P51686 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCR9P51686 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCR9P51686 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.47■■□□□ 1.03
CCR9P51686 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCR9P51686 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCR9P51686 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCR9P51686 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCR9P51686 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCR9P51686 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCR9P51686 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCR9P51686 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CCR9P51686 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.46■■□□□ 1.03
CCR9P51686 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.46■■□□□ 1.03
CCR9P51686 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCR9P51686 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCR9P51686 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCR9P51686 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCR9P51686 DUX4L29-201ENST00000425409 679 ntBASIC21.45■■□□□ 1.02
CCR9P51686 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCR9P51686 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCR9P51686 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCR9P51686 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCR9P51686 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCR9P51686 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCR9P51686 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCR9P51686 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCR9P51686 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CCR9P51686 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
CCR9P51686 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCR9P51686 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCR9P51686 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCR9P51686 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCR9P51686 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCR9P51686 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.42■■□□□ 1.02
CCR9P51686 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCR9P51686 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.42■■□□□ 1.02
CCR9P51686 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.41■■□□□ 1.02
CCR9P51686 AC010501.1-201ENST00000606270 1962 ntBASIC21.41■■□□□ 1.02
CCR9P51686 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCR9P51686 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.41■■□□□ 1.02
CCR9P51686 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.41■■□□□ 1.02
CCR9P51686 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.41■■□□□ 1.02
CCR9P51686 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCR9P51686 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCR9P51686 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCR9P51686 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCR9P51686 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCR9P51686 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCR9P51686 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CCR9P51686 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCR9P51686 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCR9P51686 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CCR9P51686 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCR9P51686 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCR9P51686 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCR9P51686 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCR9P51686 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.38■■□□□ 1.01
CCR9P51686 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.38■■□□□ 1.01
CCR9P51686 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCR9P51686 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.38■■□□□ 1.01
CCR9P51686 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCR9P51686 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCR9P51686 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCR9P51686 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.37■■□□□ 1.01
CCR9P51686 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCR9P51686 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCR9P51686 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCR9P51686 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCR9P51686 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCR9P51686 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCR9P51686 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.35■■□□□ 1.01
CCR9P51686 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.35■■□□□ 1.01
CCR9P51686 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCR9P51686 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.35■■□□□ 1.01
CCR9P51686 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.35■■□□□ 1.01
CCR9P51686 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCR9P51686 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms